Gene PICST_75853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_75853 
SymbolHYR6.6 
ID4836740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp20078 
End bp21326 
Gene Length1249 bp 
Protein Length416 aa 
Translation table12 
GC content41% 
IMG OID640388055 
Producthyphally regulated cell wall protein 
Protein accessionXP_001382762 
Protein GI126132474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCT CTAAATTATT AGCAGCAACA TTCTACTTCA GTGCAGCTGC CTTTGCACTT 
GATATTACTA CCCAAAGAAT TGATAGAGGT TATGTTGATC TTAATGTTGG TTCTATTACC
ATTGAATCTG GAGCTTACTG GTCTATTATT GATAACGCTA TCAGTGTTTT AGTGGGAGAT
CTTACTGTTA AACAAAATGG TGGCTTCTTC ATCACTGCAA CTAGTAGTAT TATTGGTTTG
TCTGTCACTC TTGCATCTGG TTTGGGTAAC ATCAACAACG CTGGTGTTAT TGCTTTCAAC
GGTGCTAACT CGTTGCTTCC TCCAACCTAT AATTTGATCG GTCTCTCTTT CACAAACAGT
GGTGAGTTCT ACTTAGTGAG TAGTGGAAAT ATTGGTGTTG CTACAAAGGG CCTTTTTGCA
CCATCGTGGA AGAACACCGG TTTGATTTCT TTCTACTCTG CTAAGAGAAG TGCCGATGGT
GTCGTTAACC TTGGTGCTTT AGGATTCCCA ATTCAAAATA ATGGTCAAAT TTGTTTGCAC
AATGAGTTGT ACCAGCAGAC TACCAGTATC ACTGGTACTG GTTGTATTAC CGCTGACTTG
GATTCAACCA TCTTTTTTGC AAACACTTTG TTGAACATTG ACTCTAATCA AGTTGTCTAT
TTGGCTGACT CTCAATCTTC AGTCAGAGCT ACTGCCATCT CCTTGCCAAA GACCTTCACG
ATTGCCGGTT TCGGTAACGG TAATAAGATT GGTTTGGATA TTCCTCTTGT AAGTCTTCCA
TTCTTGAGCA CCTACGACTA TGACTCCTCT TCTGGTATCT TGACCCTTCG TGGTGCAGGT
TTGTTATCTC AAAAATTTAA GATTGGATTG GGTTACAATA AGAACTACTT CAAGATTACA
ACTGATACGT CTCTCGGTTT GTTGAGCGTT CCATTGGGTG CCGTTACTTA CACTGGACCA
GTTCCAAACA ACAAGATTCC AGCTCAATGT AAGCCATGCA AATTATACCC ATCTGCACCA
GGTGCAGAAC CAACTGTTAC TACAACTACT GTTGTTTCCA CGAAGTCTGA TGGTTCCGTC
TGTACTGATA TTGATCAAAT TATTATTTCT CATGACACAA AGGCCAGTTG GTTTACTTCA
ACTTCTGTTG TATCTGAAAT TTGTAGCACC AAGCAAAACT CTCAAACTAC AAAGACCTCT
ACTTGGACTG GAACATTCAC CACCACTGTC ACCGAGACTG ACACTCCAG
 
Protein sequence
MLISKLLAAT FYFSAAAFAL DITTQRIDRG YVDLNVGSIT IESGAYWSII DNAISVLVGD 
LTVKQNGGFF ITATSSIIGL SVTLASGLGN INNAGVIAFN GANSLLPPTY NLIGLSFTNS
GEFYLVSSGN IGVATKGLFA PSWKNTGLIS FYSAKRSADG VVNLGALGFP IQNNGQICLH
NELYQQTTSI TGTGCITADL DSTIFFANTL LNIDSNQVVY LADSQSSVRA TAISLPKTFT
IAGFGNGNKI GLDIPLVSLP FLSTYDYDSS SGILTLRGAG LLSQKFKIGL GYNKNYFKIT
TDTSLGLLSV PLGAVTYTGP VPNNKIPAQC KPCKLYPSAP GAEPTVTTTT VVSTKSDGSV
CTDIDQIIIS HDTKASWFTS TSVVSEICST KQNSQTTKTS TWTGTFTTTV TETDTP