Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_75853 |
Symbol | HYR6.6 |
ID | 4836740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 20078 |
End bp | 21326 |
Gene Length | 1249 bp |
Protein Length | 416 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388055 |
Product | hyphally regulated cell wall protein |
Protein accession | XP_001382762 |
Protein GI | 126132474 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGATCT CTAAATTATT AGCAGCAACA TTCTACTTCA GTGCAGCTGC CTTTGCACTT GATATTACTA CCCAAAGAAT TGATAGAGGT TATGTTGATC TTAATGTTGG TTCTATTACC ATTGAATCTG GAGCTTACTG GTCTATTATT GATAACGCTA TCAGTGTTTT AGTGGGAGAT CTTACTGTTA AACAAAATGG TGGCTTCTTC ATCACTGCAA CTAGTAGTAT TATTGGTTTG TCTGTCACTC TTGCATCTGG TTTGGGTAAC ATCAACAACG CTGGTGTTAT TGCTTTCAAC GGTGCTAACT CGTTGCTTCC TCCAACCTAT AATTTGATCG GTCTCTCTTT CACAAACAGT GGTGAGTTCT ACTTAGTGAG TAGTGGAAAT ATTGGTGTTG CTACAAAGGG CCTTTTTGCA CCATCGTGGA AGAACACCGG TTTGATTTCT TTCTACTCTG CTAAGAGAAG TGCCGATGGT GTCGTTAACC TTGGTGCTTT AGGATTCCCA ATTCAAAATA ATGGTCAAAT TTGTTTGCAC AATGAGTTGT ACCAGCAGAC TACCAGTATC ACTGGTACTG GTTGTATTAC CGCTGACTTG GATTCAACCA TCTTTTTTGC AAACACTTTG TTGAACATTG ACTCTAATCA AGTTGTCTAT TTGGCTGACT CTCAATCTTC AGTCAGAGCT ACTGCCATCT CCTTGCCAAA GACCTTCACG ATTGCCGGTT TCGGTAACGG TAATAAGATT GGTTTGGATA TTCCTCTTGT AAGTCTTCCA TTCTTGAGCA CCTACGACTA TGACTCCTCT TCTGGTATCT TGACCCTTCG TGGTGCAGGT TTGTTATCTC AAAAATTTAA GATTGGATTG GGTTACAATA AGAACTACTT CAAGATTACA ACTGATACGT CTCTCGGTTT GTTGAGCGTT CCATTGGGTG CCGTTACTTA CACTGGACCA GTTCCAAACA ACAAGATTCC AGCTCAATGT AAGCCATGCA AATTATACCC ATCTGCACCA GGTGCAGAAC CAACTGTTAC TACAACTACT GTTGTTTCCA CGAAGTCTGA TGGTTCCGTC TGTACTGATA TTGATCAAAT TATTATTTCT CATGACACAA AGGCCAGTTG GTTTACTTCA ACTTCTGTTG TATCTGAAAT TTGTAGCACC AAGCAAAACT CTCAAACTAC AAAGACCTCT ACTTGGACTG GAACATTCAC CACCACTGTC ACCGAGACTG ACACTCCAG
|
Protein sequence | MLISKLLAAT FYFSAAAFAL DITTQRIDRG YVDLNVGSIT IESGAYWSII DNAISVLVGD LTVKQNGGFF ITATSSIIGL SVTLASGLGN INNAGVIAFN GANSLLPPTY NLIGLSFTNS GEFYLVSSGN IGVATKGLFA PSWKNTGLIS FYSAKRSADG VVNLGALGFP IQNNGQICLH NELYQQTTSI TGTGCITADL DSTIFFANTL LNIDSNQVVY LADSQSSVRA TAISLPKTFT IAGFGNGNKI GLDIPLVSLP FLSTYDYDSS SGILTLRGAG LLSQKFKIGL GYNKNYFKIT TDTSLGLLSV PLGAVTYTGP VPNNKIPAQC KPCKLYPSAP GAEPTVTTTT VVSTKSDGSV CTDIDQIIIS HDTKASWFTS TSVVSEICST KQNSQTTKTS TWTGTFTTTV TETDTP
|
| |