Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_70878 |
Symbol | |
ID | 4837272 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1662634 |
End bp | 1663264 |
Gene Length | 631 bp |
Protein Length | 124 aa |
Translation table | 12 |
GC content | 35% |
IMG OID | 640388587 |
Product | predicted protein |
Protein accession | XP_001382549 |
Protein GI | 126132048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGCAATTCAT AAAAGCGATG TCTGGTATGT TGTGATTGAT ATATAAGCAA ATGTTTGATT TATCGATTGT TATCTCGTGT ATGACTCGAT ATTACACTTT TACTAAAAGA AGGTTAAACT AACAATATCA CAGTCGATTT CAATACTGTT GCAACTGAAT TCTGCCACTT TTACTACCAA CAATTTGACT CTGACAGAAC CCAATTGGGT AATTTGTACA GAGATCAGTC AATGTTGACC TTTGAAACCT CTCAATTACA AGGAGCCAAG GACATAGTTG AAAAATTGGT ATCTTTACCA TTCCAAAAGG TAGCCCACAG AATATCTACT TTGGATGCTC AACCAGCCTC TCCATCTGGA GATATTTTGG TCATGGTTAC TGGTGAGTTA TTGATTGACG AGGAACAAAA TGCCCAACGT TATTCTCAAG TTTTCCATTT GATTCCAGAT GGAAACTCCT ACTATGTTTT CAATGATATC TTTAGATTGA ACTACTCTTA AATATGAGGT CAAATATGAC AAATTAAGCT CCCTTGGTGA TATAGAGTTC AAATAATACA AAATATTTAG CCGATTTTCT AGGGTGTCTC AGCGTTGTTG TCTACGTAGT TTTGTATAGT ATGATAAACA T
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Protein sequence | MSVDFNTVAT EFCHFYYQQF DSDRTQLGNL YRDQSMLTFE TSQLQGAKDI VEKLVSLPFQ KVAHRISTLD AQPASPSGDI LVMVTGELLI DEEQNAQRYS QVFHLIPDGN SYYVFNDIFR LNYS
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