Gene PICST_70878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70878 
Symbol 
ID4837272 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1662634 
End bp1663264 
Gene Length631 bp 
Protein Length124 aa 
Translation table12 
GC content35% 
IMG OID640388587 
Productpredicted protein 
Protein accessionXP_001382549 
Protein GI126132048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGCAATTCAT AAAAGCGATG TCTGGTATGT TGTGATTGAT ATATAAGCAA ATGTTTGATT 
TATCGATTGT TATCTCGTGT ATGACTCGAT ATTACACTTT TACTAAAAGA AGGTTAAACT
AACAATATCA CAGTCGATTT CAATACTGTT GCAACTGAAT TCTGCCACTT TTACTACCAA
CAATTTGACT CTGACAGAAC CCAATTGGGT AATTTGTACA GAGATCAGTC AATGTTGACC
TTTGAAACCT CTCAATTACA AGGAGCCAAG GACATAGTTG AAAAATTGGT ATCTTTACCA
TTCCAAAAGG TAGCCCACAG AATATCTACT TTGGATGCTC AACCAGCCTC TCCATCTGGA
GATATTTTGG TCATGGTTAC TGGTGAGTTA TTGATTGACG AGGAACAAAA TGCCCAACGT
TATTCTCAAG TTTTCCATTT GATTCCAGAT GGAAACTCCT ACTATGTTTT CAATGATATC
TTTAGATTGA ACTACTCTTA AATATGAGGT CAAATATGAC AAATTAAGCT CCCTTGGTGA
TATAGAGTTC AAATAATACA AAATATTTAG CCGATTTTCT AGGGTGTCTC AGCGTTGTTG
TCTACGTAGT TTTGTATAGT ATGATAAACA T
 
Protein sequence
MSVDFNTVAT EFCHFYYQQF DSDRTQLGNL YRDQSMLTFE TSQLQGAKDI VEKLVSLPFQ 
KVAHRISTLD AQPASPSGDI LVMVTGELLI DEEQNAQRYS QVFHLIPDGN SYYVFNDIFR
LNYS