| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70712 |
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| Symbol | UTP6 |
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| ID | 4836711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2458463 |
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| End bp | 2460498 |
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| Gene Length | 2036 bp |
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| Protein Length | 434 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388026 |
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| Product | U3 snoRNP protein |
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| Protein accession | XP_001382698 |
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| Protein GI | 150864022 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5191] Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.555676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA AAGTGAGATA CTATTTGGAA CAGTCTGTTC CCGAGTTAGA GGACTTGAAG
AGCAAGGGCC TTTTTGAAAA AAATGAAATC ACCATGATTA TGAGAAGAAG AACCGACTTC
GAGCACAGAA TCCAAGGCAG GGGAAGTAAG CCTAGAGATT TCACCAAATA CGCAGAATTT
GAAGTTAACT TGGAGAAATT GAGAAAGAAG AGATACAGCA GATTATCAAA AGTAGGGGTT
ATTGACACCA AGCCCAGCAT TAGTGACTGG GCTGGAACTA GAAGAATCAT GTTCATTTTT
GAGAGAGCTA CTAGAAGATA TCCAGGTGAC TTGGACTTAT GGTCGCAATA CTTGAAGTTT
GCCAAATCAA ATGGTGCTAT AAAGGTTATT TATAAGGTTT ATTCTAGACT TTTGCAATTA
CAACCCCGTA ATATAGATGC TTGGTTATCT GCGGCAAAGT ATGAGTTCGA AACCAATGCC
AACGCAAAGG GAGCAAGAAT GCTTTTCCAA AGAGGGTTAA GATTGAATCC AGAATCGTTG
GAATTGTGGT TGAGCTATGC CCAATTCGAG TTGACGTATA TATCGAGATT ACTTGCCAGA
AGAAAAGTTT TGGGTCTCAT AACTGAAAAG CAACAGCTGG ACGAAATGAC TAGCCAGCAA
GAAAGATTAG CCAAGTCTAT TGCAGACTCA GCCATAGGTG ATGACGACAA AGACTTTAAC
GATGATAAGA TCGAATTGCC TTCAACAGAA GAAATGAAAG AACAATTGCA TCACTTACCC
GAAGCAGACA TGAACATGTT GGGTAATCCC GAAACCAATC CAGCCTTGAG AGGAGACGTA
GCGTTAACAG TTTTTGACTT GTGTGTTCCT GCAATTATCA AGAGCATTCC TGAATTTTCT
ACTGTAGTCA ATGCTCAAGA CAAGACTTTC GAGGTTGTTG ACCATTTCTT ATCCATGATC
GACTTGTTCG AGGACCTCAA CAGAGACCAC TTATACTTAC ACATCTTGAA CTTTTTACAA
AGTAATTATC CTCATGATTT ACGTACAAGT TTGATCGACA TATGTTTGCC TATCAGAAAT
GTTAAACGGA CCAGCCCTCA GTTGTCCGAG TTGTTACAAT TGGCCGTTAA TAAATTCATT
GCATACAAGT CTAAGTTGAG AGACTTACAA GAGAAGGATA CATTAACTAA CTTATTCGTT
AACCAGCTTA CAAACCAGTT CTTGAGCACT CACGAAGTCG CTGATGGTTC TGAAAAGATA
GACACTTTAT TAAGAGCCAT TATTAAGAAG TGCCGCACCA TCTAGAATAG ATAGACATTA
ATACATAAAT ATAGAACTAT AGACTGTGGT GGAACTAGAA CTACAACGAC TAATAGAAGT
GGGACTCATA AACTAGTCCA ATTTGTTTTC GCTGTCCAAA TTGAACTTTC CTAAGTTCTT
GACACGACGA GAGATGGCAG TATAACTCAA GGTAAACACC ACCAATCCAG AGAGTACGGC
TGTAAGCACC AAATAGAAGG TAAACCACTG GTAACTTATA GGAACAAAAG CCGCTGGGAA
TCTGTAGAAG CCATCTGCAT AAGGCAAATT CTCAGTCTTT CCGGCTATCG AGTTTACAGG
AACAATCTGA TCAAGCCATC TGACAGCAAA ATTGAGAGTG AGCAGGTCAC CAATGACGAT
TCTAGTGACA TTAGTTCCTG AAGAATAAGC CACGGCACTG ATGAAAGTGT TTTCTTTATG
GTTGCGGTTA GCTGGCTTCG TCAAAAGGAC ATTTAAAGAC GAATCGATAT CCAAATGAGA
GTCGTGTATT TCTCCTCTGA AATTGAAAGT CAAAGGAACA TAAGCTCCCC CCTTTTGCAA
GTAGTTGGCA TCAGCACTAA CAGGTAATCT ACAGCCAAAT GGCACGTCTT CGTGGATGTA
CAATTGGAAC AAATGGTATA AGTTGTCTGT GAATTCGATA GTACAGTTGA AATCAGCATT
GACTCCATAT TCAAAGCTCA AAGGTCTGTT GGTCTCTTTA CAAGTAGGAA AGGGAC
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| Protein sequence | MAEKVRYYLE QSVPELEDLK SKGLFEKNEI TMIMRRRTDF EHRIQGRGSK PRDFTKYAEF
EVNLEKLRKK RYSRLSKVGV IDTKPSISDW AGTRRIMFIF ERATRRYPGD LDLWSQYLKF
AKSNGAIKVI YKVYSRLLQL QPRNIDAWLS AAKYEFETNA NAKGARMLFQ RGLRLNPESL
ELWLSYAQFE LTYISRLLAR RKVLGLITEK QQSDEMTSQQ ERLAKSIADS AIGDDDKDFN
DDKIELPSTE EMKEQLHHLP EADMNMLGNP ETNPALRGDV ALTVFDLCVP AIIKSIPEFS
TVVNAQDKTF EVVDHFLSMI DLFEDLNRDH LYLHILNFLQ SNYPHDLRTS LIDICLPIRN
VKRTSPQLSE LLQLAVNKFI AYKSKLRDLQ EKDTLTNLFV NQLTNQFLST HEVADGSEKI
DTLLRAIIKK CRTI
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