Gene PICST_70660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70660 
Symbol 
ID4836792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1083573 
End bp1085261 
Gene Length1689 bp 
Protein Length459 aa 
Translation table12 
GC content43% 
IMG OID640388107 
Productpredicted protein 
Protein accessionXP_001382985 
Protein GI150864244 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.245178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGAACAAAG AAGAGGCTTT GAAGCTCAAA GATCAGGGCA ATGCTCTTTT GAAAGAACAC 
AAATTTGACC AGGCTATCGA AGCCTATACC AAGGCCATTG AGTTGGATCC AGAGAACGCT
ATCTTCTATT CCAACAGGGC TCAAGTCAAC ATCAAGTTGG AAAACTATGG TTTAGCCATT
ATTGACTGTG ACAAGGCCCT AGAAGTTGAT CCCAACATGA TGAAGGCTTA TTACAGAAAG
GGTGTTTCCC AGATGGCTAT ATTGAAGCAC AAGGAAGCCC AAGGTAACTT CAAGATCATT
TTGAAAAAGT TGCCCAATGA TAAGTTGACG TTGGAAAACT ACAAGCAGTG TACAAACTAC
TTGAAACGTC AGGCGTTCGA ACGAGCCATT GCTGGTGACA CAAAGATCTC AATCATCAAC
AGCATCGACT ACGAAGGAAT CCAGATTGAA AAGTCCTGGA CAGGCCCCAG CTTGAGCATC
CACGCAACAA AGCCCAAAGA CGATAAGTCC GATGTCCATG TAGATATTGA GGGATTGGAC
ATCGCTTACT TGAAGAATAT GATCGAGTTG TTCAAGAAGG ATGGCAGATT GCCTAAGAAG
CATGTTTTTG CAATCATTGC TAAAGTGCAC GAACTCTTCA AAAGCGAAAA GTCCATGGTA
GAAATATCGT TGCCACACCC AGGATTGACC GGAGAAGGAT CTCCAGATGA GATTTTGCTA
GAAAATGGTA AGAAGTTAAC AGTGGTAGGC GATACTCACG GACAGTTTTA CGATGTTTTG
AACTTGTTTC ACAAGTTCGG TCACGTAGGG GAAGATCATA TCTACTTGTT CAATGGTGAT
TTTGTAGATA GAGGCTCGTG GTCTTGTGAG GTCGCTTTGT ACTTGTACGT ATTAAAGATA
ATATTCCCTC GATCCGTGTA CATAAATAGG GGGAATCACG AAACCAGCGA CATGAACAAG
ACGTACGGGT TTACTGATGA ATGTGAATTC AAGTACAACA AAAAGATCTT TGAAGCTTTC
TCTGAATCCT TCGGAGCTTT ACCTTTAGCA ACTCTCATCA ACCGTTCGTA CTTGTGTATG
CACGGAGGTC TTTTCTCTAA CGACCATGTC ACCTTGGACG ATCTCAAAAA CATAAACAGA
TTCCCCATTT CAGGTTCTTC TCAACCTCCC AGAGAAGGTC TAGCCATGGA ATTGTTGTGG
ACAGACCCCC AACCATCTAA TGGCCGTGCT CCTTCTAAAA GAGGTATTGG TATGCAATTC
GGACCCGATA TCACCGAGAG ATTCTGCTTG AGCAACAAGA TCAGAAAGGT GTTGAGATCG
CACGAAGTAA GAATGGGCGG CGTAGAACTG GAACACAATG GAAGATTGAT CACAGTGTTC
AGTGCTCCTA ACTACTGTGA CTCGACGGGT AACTTGGGAG GTGTGGTTCA TTTTACGGTG
AACAAGGACT ACGACTCCGA AAAGGACAAT GGAGAAGGAT TTAGACAAGT CGAAGAAAGC
AACTGTCCCT GGACTTTGGA AACAGAAACC TTTGATGCTG TGCCACATCC AGACATTAAG
CCAATGGCAT ACTCCAAAGG GGGCTTTGGC TTCTGACTGC ATTATGTATT ATAACGATAG
AGTAGACTGT ATCATATAAT GATAGTAATA TTGAAATCAA AGATAGTAAA CAATGATAAT
TTACAATTT
 
Protein sequence
MMKAYYRKGV SQMAILKHKE AQGNFKIILK KLPNDKLTLE NYKQCTNYLK RQAFERAIAG 
DTKISIINSI DYEGIQIEKS WTGPSLSIHA TKPKDDKSDV HVDIEGLDIA YLKNMIELFK
KDGRLPKKHV FAIIAKVHEL FKSEKSMVEI SLPHPGLTGE GSPDEILLEN GKKLTVVGDT
HGQFYDVLNL FHKFGHVGED HIYLFNGDFV DRGSWSCEVA LYLYVLKIIF PRSVYINRGN
HETSDMNKTY GFTDECEFKY NKKIFEAFSE SFGALPLATL INRSYLCMHG GLFSNDHVTL
DDLKNINRFP ISGSSQPPRE GLAMELLWTD PQPSNGRAPS KRGIGMQFGP DITERFCLSN
KIRKVLRSHE VRMGGVESEH NGRLITVFSA PNYCDSTGNL GGVVHFTVNK DYDSEKDNGE
GFRQVEESNC PWTLETETFD AVPHPDIKPM AYSKGGFGF