| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70563 |
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| Symbol | PFK1 |
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| ID | 4837256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 830728 |
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| End bp | 834002 |
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| Gene Length | 3275 bp |
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| Protein Length | 978 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388571 |
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| Product | 6-phosphofructokinase, alpha subunit |
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| Protein accession | XP_001382396 |
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| Protein GI | 150863799 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0205] 6-phosphofructokinase |
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| TIGRFAM ID | [TIGR02478] 6-phosphofructokinase, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.973256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.501481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGCAGATCGG TCTTGTCTCA ATTCTGCGTT GAATTATATA AACAGGCTTT ACTTCGTTCA
GTAGTTCGCT CTCGGCACGG TGTTCAGTCA ATTGAATTCA CAGCTGAAGT TTCGAAACCT
TTTTTGAGTC TATCTTTTTC GTTATCAACC CCTGATAGAT TCCGATTGAA ACTCACTTCC
AGAACTTCTA AGTCAATCAA CATCGACTTT TTTTGAACGT TTTTAGTATT GATCGAGTCC
AGCATAATAC TTCAAACTAA CGATGCCTGT TCCAGAGTCG ATCCAGGGCC TCAGCTTCGT
TCTGATTGTC ACCAACGATC AAACGAAATT TGAGAAGTTG GCTAAATTCT ACACCAGATT
CGGCTTCAAA TTGCTGAAAA ATTTCTCGAA AGTGTCCAAC AACGGTGCTG CTTCGGCCTC
CAACAACCCA CGCTTGCATT TGGGAGTTTC TAACGACTCT TTGAGAGAGG TCTGGCTTGA
ATCCTTTCCT TTGCAGAACC TAGATGGCAA TGGAAATGTG ACTCCTTGGC AGGAATTGGC
TGTATACGAT GGTGATAACT GCGAAAAATT GTGTGATTCT ACTTTAATCA AGATTCGGTT
GTCGAATTTG AACGTAATCA GTGATGTCGT TAAAAAGTTT CGCTTTTTCA GTACCGATTT
GAAGCAAATT AAGGCTATTT TAACTGAATT GAAGTGGACC TTCGTAGAAT TAGAAGGCGA
AATTGACACC AAGGACCCCC TAGGTAACGT GTTGATCTTC TCCAGCACCG CTAACCCGTT
GTCGAAGGAG TCGTTCGGTT CTGCGGACGA GTACTTAACG ATAAAGTCTC AGCAGCTTCT
TCGGGATTTG TCCAAGTCCT CAGAAGTCGA TTCGACATAT TCTGAGTCGG TTTCGGAGAC
AATCAGAAAG AAAAAAATCG CCGTCATGAC TTCTGGAGGT GATGCTCCAG GTATGAACCC
TGCTGTGAGA GCTGTTGTCA GAGCCGGAAT CTTTTTGGGA TGTGACATGT TTGCTGTCTA
CGAAGGCTAC TCGGGTTTGG TTAAAGGTGG AGACCTCTTG AAGAAGATGG AGTGGGGAGA
TGTCAGAAAC TACTTGTCAT ACGGTGGGAC TAACATTGGT ACTGCCAGAT GTATGGAGTT
CAAGGAACGT GAAGGCAGAT TGTCTGGTGC GTACAATATG ATTGTCAACG GAATTGATGC
TCTTATTGTG TGTGGAGGTG ATGGTTCATT GACTGGTGCT GATTTGTTCA GAAGCGAGTG
GCCTTCTTTG CTTGACGAAT TGATAGAAAC TGCTCGTTTG ACCAAAGAAG AGGTCGCCCC
ATACAGACAC CTCACCATTG TAGGATTGGT GGGCTCTATA GATAACGACA TGTCATGTAC
AGATGCAACA ATTGGTGCCT ATTCGGCGTT AGAGAGAATC ACCGAGATGG TGGACTACAT
CGACGCTACG GCCAAGTCAC ATTCCCGTGC TTTTGTTGTT GAAGTTATGG GTAGACATTG
TGGCTGGCTT GGCTTGATGT CTGGGTTGGG TACTGGAGCT GACTTCATCT TCATTCCTGA
AAGACCTCCC AGGGCTGGCA AGTGGCACGA CGACTTGAAG ACGGTCTGCA AGCGCCACAG
AGAAAAAGGA AGAAGAAAGA CGGTTGTCAT TGTGGCCGAG GGAGCCATCG ATGACGAGTT
GAATCCCATT TCTTCGGAAG AGGTCAGAGA CGTCTTGGTC GAGTTGGGTT TGGACACCAG
AATCACCACC TTAGGCCATG TGCAAAGAGG TGGTACTGCT GTAGCTTACG ACAGAATGCT
TGCTACCTTA CAAGGTGTAG ATGCTGTCAA GGCTGTTCTT GAGTCTACTC CTGAAACACC
CTCTCCAATG ATTGGTGTTT TTGAGAATAA GATCGTCAGA CAACCTTTGG TGGAAGCTGT
GAGATTGACC AAGTCTGTGG CCACAGCAAT TGAAAACAAG GATTTCGACA GGGCTATGAG
CTTGAGGGAT ACTTCGTTTG CTGACGCATA CTCTCACTTC TTGTCTACCT CTGTAGATGA
TGATGGTCTG TCTGAATTAC CTAAAGACAA GCAGTTGAAC ATCGGTGTAA TCCATGTAGG
AGCTGCTTCG TCTGGTCTTA ATGCCGCTAC CAGAGCTGCT GCCTTGTACA GTTTGTCTCG
TGGTCACAAG TTGTTTGCAA TCCAAAACGG TTTCTCCGGT TTAATTAAGG ACGGAATAGT
CAAGGAATTG AAGTGGCTTG ATGTCGAGGA CTGGCACAAC AGAGGTGGCT CGGAAATTGG
AACCAACAGA TCTTTGCCCT CGGAAAACTA CGGGAAGGTT GCTTTCTATT TGCAAAAGTA
CAATTTGCAA GGTTTGATTA TCATTGGAGG TTTCGAGGCC TTTACTGCCT TGAACGAGTT
GAACGAAAAG GACGACAGTT ATCCTATATT TGCAATGCCC AAAGTAGCTA TTCCAGCTAC
GGTTTCTAAC AACGTGCCTG GAACAGAGTA TTCTTTGGGT TCAGATACCT GTTTGAACCA
GTTGGTTAAG TATTGTGATG CCGTCAAGCA GTCAGCCTCA TCGTCGAGAA GAAGAGTATT
CGTTGTAGAA GTGCAAGGGG GACATTCTGG TTACGTTGCA GCCTACACTG GTTTAATTAC
AGGTGCTATG GCCACATATG CCCCCGAATC CAAGATAAAC TTAAGAACTA TACAAGAGGA
TATAGACTTA TTGTTCAACG TTTTTGCCCA TGACAGAGGT GAAGACAACA ACGGTAAGAT
GTTGATCAGA AACGAGCAGG CTAGTACCGT ATACTCGACC GAGTTAATCG CAGACATCAT
CAAAGAAAAT GCTAAGGGCA GATTCGAAAC AAGAACGGCA ATACCCGGGC ATGTTCAGCA
AGGCTTTACT CCGTCTTCGG CCGACAGAGT TAATGCTGTG AAATTTGCAG TAAAATCCGT
TCAATATATT GAAGAGTGGA ATGGCTCGTG TGAACGAGAC CCGGCTATTG TAGATTACGA
GAAGACTGCG TCTGTCGTCA TTGGCATCCA AGGTGCCCAG GTCAAGTTTA CATCGGTCAA
GGAATTATAC CAGAACGAAG CCAATATAAA GTTGAGAAAG GGTAAGACCG TCCACTGGAA
GGACATGTCT GATGTAAGCG ACATGTTGAG TGGTCGCCTC AATTTGCGAG CCAAGAAGCA
GTCGGTAAAG TTGCTTTAGA TTACCCTTGT CTGGATGCTG CGAAAATAAC GTTCATTTCT
TTATAAAATA TTAATACACA TACATGACTT TGTTA
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| Protein sequence | MPVPESIQGL SFVSIVTNDQ TKFEKLAKFY TRFGFKLSKN FSKVSNNGAA SASNNPRLHL
GVSNDSLREV WLESFPLQNL DGNGNVTPWQ ELAVYDGDNC EKLCDSTLIK IRLSNLNVIS
DVVKKFRFFS TDLKQIKAIL TELKWTFVEL EGEIDTKDPL GNVLIFSSTA NPLSKESFGS
ADEYLTIKSQ QLLRDLSKSS EVDSTYSESV SETIRKKKIA VMTSGGDAPG MNPAVRAVVR
AGIFLGCDMF AVYEGYSGLV KGGDLLKKME WGDVRNYLSY GGTNIGTARC MEFKEREGRL
SGAYNMIVNG IDALIVCGGD GSLTGADLFR SEWPSLLDEL IETARLTKEE VAPYRHLTIV
GLVGSIDNDM SCTDATIGAY SALERITEMV DYIDATAKSH SRAFVVEVMG RHCGWLGLMS
GLGTGADFIF IPERPPRAGK WHDDLKTVCK RHREKGRRKT VVIVAEGAID DELNPISSEE
VRDVLVELGL DTRITTLGHV QRGGTAVAYD RMLATLQGVD AVKAVLESTP ETPSPMIGVF
ENKIVRQPLV EAVRLTKSVA TAIENKDFDR AMSLRDTSFA DAYSHFLSTS VDDDGSSELP
KDKQLNIGVI HVGAASSGLN AATRAAALYS LSRGHKLFAI QNGFSGLIKD GIVKELKWLD
VEDWHNRGGS EIGTNRSLPS ENYGKVAFYL QKYNLQGLII IGGFEAFTAL NELNEKDDSY
PIFAMPKVAI PATVSNNVPG TEYSLGSDTC LNQLVKYCDA VKQSASSSRR RVFVVEVQGG
HSGYVAAYTG LITGAMATYA PESKINLRTI QEDIDLLFNV FAHDRGEDNN GKMLIRNEQA
STVYSTELIA DIIKENAKGR FETRTAIPGH VQQGFTPSSA DRVNAVKFAV KSVQYIEEWN
GSCERDPAIV DYEKTASVVI GIQGAQVKFT SVKELYQNEA NIKLRKGKTV HWKDMSDVSD
MLSGRLNLRA KKQSVKLL
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