Gene PICST_70383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70383 
SymbolNSA2 
ID4836664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2050340 
End bp2051202 
Gene Length863 bp 
Protein Length261 aa 
Translation table12 
GC content46% 
IMG OID640387979 
ProductKiller toxin Resistant 
Protein accessionXP_001383159 
Protein GI126133268 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2007] Ribosomal protein S8E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.650262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAA ACGAATATAT CGAGCAGCAC ATCAAGCAGC ACGGGAGAAG ATTGGACCAT 
GAGGAGAGAA AGAGAAAGAA GGAAGCCAGA GAGGGCCACA GAATCGCAAA AGATGCCCAG
ACCTTGAAGG GATGGAGAGC TAAACAGTTT GCCAAAAAGA GATACAGCGA GAAGGTGGCC
ATGAAAAAGA AGATCAAGGC TCACCAGGAA TCGAAGGTTA ACGGCCCAGC CACTCCTAAG
GAGGACGACG GCGAGGCCTT GCCTACATAT CTTTTGGATC GTCAGACCAA CAACACTGCG
AAGGCCATTT CTTCTTCCAT CAAGCAGAAG AGATTGGAGA AGGCAGACAA GTTTTCCGTG
CCTTTGCCTA AAGTGAGAGG TATTTCTGAG GAAGAGATGT TCAAGGTCAT CAAGACCGGG
AAGTCCAAGC ACAAGTCGTG GAAGAGAATG ATTACCAAAC ACACCTTTGT AGGAGAAGGA
TTCACTCGTA GACCAGTGAA GATGGAAAGA ATCATCCGTC CAGCAGCCTT GAGACAAAAG
AAAGCCAACG TCACTCATCC TGAGTTGGGT GTCACAGTCT TCTTGCCCAT TTTGGGAGTT
AAGAAGAACC CACAGTCGCC TATGTACACG CAGTTGGGAG TCTTGACCAA GGGTACTATC
ATCGAAGTCA ATGTATCTGA GTTGGGTTTG GTGACAGCCG GAGGTAAGGT TGTTTGGGGA
AAATACGCCC AGATCACCAA CGAGCCCGAC AGAGATGGCT GTGTCAACGC CGTATTGTTG
GTATAAAATC ATTGCATCAA GATTAATGGG AGGTTGTATT TCTAGTTATT CATATTAAAT
TTCAAATTTA TACAGTTATA TTC
 
Protein sequence
MPQNEYIEQH IKQHGRRLDH EERKRKKEAR EGHRIAKDAQ TLKGWRAKQF AKKRYSEKVA 
MKKKIKAHQE SKVNGPATPK EDDGEALPTY LLDRQTNNTA KAISSSIKQK RLEKADKFSV
PLPKVRGISE EEMFKVIKTG KSKHKSWKRM ITKHTFVGEG FTRRPVKMER IIRPAALRQK
KANVTHPELG VTVFLPILGV KKNPQSPMYT QLGVLTKGTI IEVNVSELGL VTAGGKVVWG
KYAQITNEPD RDGCVNAVLL V