Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_70308 |
Symbol | |
ID | 4837004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 510064 |
End bp | 511124 |
Gene Length | 1061 bp |
Protein Length | 297 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388319 |
Product | predicted protein |
Protein accession | XP_001382858 |
Protein GI | 126132666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.80881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TACTTTTCAC TGGTTCAATA AATTTTTCAG TATTCTCATC TCATCCCATC TCATCGCGCA ACATGGTTAA CTACCAAACT TGGTTGAAGG AAATTGACGA CAACACCAGA CTTTCCAAGT TGTCAATTCC AGGCACTCAC AACTCCGCTG CCTGTCACAC TGCTTTGCCA TCTGTCCAAT GTCAGGGTAA ATCCGTCACC GACCAATTGA AGCATGGGGT CAGATTTTTG GATATCAGAG CCGGCAGACA ATTGATTAAA AACGACGATC CTAAGCAAGA ATTGCAAGTT ATCCATGGCA AGTTCCCTGT CAGAATTCCA TTCCCCATTC AATTAGAAGA TGTGTTGAAA GAAGTTTACG ACTTCTTGGA CGACAACAAG TCTGAAACCG TTATTGTTTC GTTGAAGCAA GAAGGGTCAA ATGACTGGGA CAACCCCAAT GACGAGTTCC CCAACTTGAT CTGGGAAAAG TACGTTGAGC CTAACAAGGA CAAATGGTAT TTGAACACCG ACATTCCAAA GGTTGGAGAT GCAAGAGGTA AGGCTGTTCT CTTCAGAAGA TTCGGAGTCA ACAACGAAGA CAGAAAAAGA GAGTTTGGCT TCGACGCGGC TTCGTGGAAG TACAACACTA CTGATGACGA CCGTGGATCG TTTGTTGTCC AGGACTTCTG TGAAGTCCAG AAGGCTGACG ACATTCCCAC CAAGATCAAC TACGTCAAAG ACTTGGCCAA CAAGGCTAAG GACTATACCA AGGACAATGA CAACAAGTTG TTCGTCAACT TCACGTCTGC TTCCAACTTC TTCGACCACG ACTGCTGGCC ACAACAGATT GCAAATGCCT TGCTCAAGAG TGATGTCGCC GACAAATTCG AGAAGGGTGT TGGTATCATC GTGTTGGACT ACGTTGAAAG CGACGACTGG AAGTTGTCCA AGAAGTTGGT TGACTCTAAC TTCTAATCTA CTTGTATTTT TGCCTACTTG GTTTGTGACT ATGTAAGTAA GAAAAAATCA TGATGAATGA TTCTACTAGT TATATCTCAA TATATGTTCA GATTGCTTTA C
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Protein sequence | MVNYQTWLKE IDDNTRLSKL SIPGTHNSAA CHTALPSVQC QGKSVTDQLK HGVRFLDIRA GRQLIKNDDP KQELQVIHGK FPVRIPFPIQ LEDVLKEVYD FLDDNKSETV IVSLKQEGSN DWDNPNDEFP NLIWEKYVEP NKDKWYLNTD IPKVGDARGK AVLFRRFGVN NEDRKREFGF DAASWKYNTT DDDRGSFVVQ DFCEVQKADD IPTKINYVKD LANKAKDYTK DNDNKLFVNF TSASNFFDHD CWPQQIANAL LKSDVADKFE KGVGIIVLDY VESDDWKLSK KLVDSNF
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