| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70266 |
|---|
| Symbol | |
|---|
| ID | 4837578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 1640348 |
|---|
| End bp | 1642321 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388893 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382545 |
|---|
| Protein GI | 150863908 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.797898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CACAGTTTTA GTTTGTTCGG ATTCGGAATC GTGGTCGGGC TGCTACTTCC TGTCGTTCCG
AGAATCACCA TATATACCGA CTTGTGGTAT TTCTGTCTCA GGCTAACCTG GTTACCGTAT
CAAAGGTACC AAAATTCCTA ACTTCCTTTT TAAAAGCACC AAAACTTGCG GACTTTTCTT
GTAGACTCCA CATACTGCTG AATTATCCCA GTGCAAATCA TCAGGCAACA CCCAACTTCC
TTGTCTTTTC ATCCCCTGAT CGTTCTGCGG TATCTTTTTC GGTTTTCCAC TCCAGAAATC
GATAAAATTT TGCAAACGGA CCACTAGATA TACACCACTA CGACTGGAAT AATAAACTTC
GTTTCATCAA CCTTAACAAC TTATCCAGTT TGTCGCCGTA CTACCGCTTG TTAGTTTGTA
TTACTCATAG AACTACTACT AGAAACAAGA TAACTGTACT TCCTATTCAT ACAACCATAT
TGCATCTAGA TCTATATCAT CAACATGACG TCAATGGAAA ACACAGAGAC CAGCATTAGA
TCTCTCAACG ATATCAACCT CGAAGAGATG GCGCAGAAAC AACAACAACA AAACATATAC
GTTACGCCAC CAGTTCTAGA GAACCAGAAG ACAGCGTCAC AGCTAAGTTT ATCCAAGAAA
AGCTCTAAAC ATTCCAACCG TGACACTACG ACACGCGGGA AATACACGTT GAACGACTTT
CAGATACTAA GAACATTGGG AACAGGGTCG TTTGGGAGAG TGCATTTGAC TAGATCCATC
CATAACGGAA GATTCTACGC CATGAAAACG TTGAAGAAGG AAATAGTGGT GAATATGAAA
CAGGTGGAAC ACACAAACGA CGAAAGAAGA ATGTTGAAAT TAGCCCAGCA TCCGTTTATC
ATCAGAATGT GGGGCAGCTT CCAAGACTGT CACAACTTGT TCATGATCAT GGATTACATA
GAAGGAGGAG AGTTGTTCTC GTTGTTGAGA AAGTCTCAAC GGTTCCCGAC TCCCGTAGCC
AAATTCTACG CTGCTGAAGT GTTCTTGGCC ATCGAATATT TGCACAAGTT GGATATCATC
TATCGTGACT TGAAGCCAGA AAACATCTTG TTGGACAAGA ATGGCCACAT CAAGTTGACA
GACTTTGGTT TCGCTAAGGA GGTGACAGAT GTAACCTACA CCTTGTGTGG AACTCCAGAT
TATATTGCTC CAGAAGTAGT TGCTACTAAG CCATACAATA AGTCAGTGGA CTGGTGGTCA
TTCGGTATTT TAATATTTGA AATGTTGACC GGATACACTC CATTCTACGA TCCGACCCCT
ATGAAGACTT ACGAAAACAT CCTTAACGGT ACCATCACCT ACCCTGACTA CTTACCTCCA
GATATCTTGG ATCTTTTACA GAAGTTGATC GTCAAGGATT TGACTCAACG TTTGGGTAAC
TTACAGGGAG GTTCTGATGA TGTGAAAAAC CATCCATGGT TCAAAGAAGT GATTTGGGAA
AGATTATTAT CAAGAGATAT AGAAACACCG TACGAGCCTC CAATCACTTC TGGTGTGGGA
GACACATCCC AGTTCGATAG ATATCCAGAG GATAAAGATC TCGACTATGG AATCAGCGGA
GTAGAAGATC CATATGGCCT GCTCTTCAAT GACTTTTAAA CTACTTACCC TCATGGAAAA
TATCCCTCAT GTTTTACGAA GCATTCTCTG TACACTAGTT TTAATCCTGC AATCATTTAC
TGTCAGATAA GCAAGTCAAA CCAAGGAACG AAACTTTCTA GCTATCCAAT CTTTTTCTTC
GTCTCTTAAG TTTGTATTTT CACTAATCTT CATTTTCTTT TCCTCTTCCA ATGCATTCAT
CGGTGAGTGC AACTTCGCCC TATTATATAG TCTAATTCTC TTCCATCCCA AGTCACTATA
TGTATATACT ATTTCTATAT ATGACACTAC AAGATGGTTT CAATGCAACA AAGG
|
|---|
| Protein sequence | MTSMENTETS IRSLNDINLE EMAQKQQQQN IYVTPPVLEN QKTASQLSLS KKSSKHSNRD
TTTRGKYTLN DFQILRTLGT GSFGRVHLTR SIHNGRFYAM KTLKKEIVVN MKQVEHTNDE
RRMLKLAQHP FIIRMWGSFQ DCHNLFMIMD YIEGGELFSL LRKSQRFPTP VAKFYAAEVF
LAIEYLHKLD IIYRDLKPEN ILLDKNGHIK LTDFGFAKEV TDVTYTLCGT PDYIAPEVVA
TKPYNKSVDW WSFGILIFEM LTGYTPFYDP TPMKTYENIL NGTITYPDYL PPDILDLLQK
LIVKDLTQRL GNLQGGSDDV KNHPWFKEVI WERLLSRDIE TPYEPPITSG VGDTSQFDRY
PEDKDLDYGI SGVEDPYGSL FNDF
|
|---|
| |