Gene PICST_70251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_70251 
Symbol 
ID4837300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp764566 
End bp765972 
Gene Length1407 bp 
Protein Length418 aa 
Translation table12 
GC content38% 
IMG OID640388615 
Productpredicted protein 
Protein accessionXP_001382916 
Protein GI150864191 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG5279] Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.107357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACT ATGAGACAGG TAGCGACCTC AATGATTTAA TATCTGATGT GAGTGTTAAA 
TTCAACAACT CCAAAGTCAG TCAAATAAGA TGCGTTTTAC TCCATCTTTG TAAATTTCGA
ATCATTGAAG AGTCCAGCAA GATTCTTACA ACGAAGCCTA AGTTGAACGA AGTATTACAC
CTAGGCGAGG CTTCAGTATA CCAGCTTTGT TACTTGCTTA AAAAGATTCT CGATGCCTTG
CGAATCCCAG CAGAAGTGGT TTTAGGGTTC TGGAAGAAGC CCAATGAATT CTATCACAAC
GAGCAATATG TCATTAATCA CAGTTGGTTG TCCATCTTGT TAGACAGCAA ATTCTATATC
TTGGATCTTT ACAATTTCAA GAATGGTTCA GTCTGTAACA TTCGGGAGAA TGCTGAAGGC
TTTAACGAAT TCTACTTCTT AGCCAGACCC TTGAGCGTTG TTTCCACACA CATTCCTTCC
GTTATCGATC TCCAACATGT TCTTCCTCCT ATAGATCCTA GTATCGCATT CTATTTGCCC
AGAGCTTACT CGGGTTTCTA CAGGAGCGGA TTGAAATTCA GAAACTTCAA CAATGCTTTG
ACCAGACTTA GAGACTTGGA ATTTTTTGAG TTAGAATTGA ATATTCCAGT AGATGTGGAA
TTGTTCACAT TGGTCAAGAC ATCTAAGGTC ACTACCAACG AACTCAGTTT GTGCCAAATT
CAATGGAACA ACAACAAGAA AATTGCAAAG ATTAAGGCTA TTCTCCCAGA AGGAGAATCT
ATCGGGGTTT TGCAAATCTT TGCCGGACCA AAAGGATTGC AGAAGCATTT TGACAATATC
CACGAGTTGG CTGTTGTTAT TCCCTTGTAT CACACCGGCG ACTACAAGCC CTCCAAGTTC
ATTCCCAGAT TTCCTACAGT CCAAAGTCAG AACAACGACT TGTATGTGAG ACAACCTCAA
ACAAACAAAA TTATAGTCAA AAATGCTTAT AATTTTGAAA TAGATCTGTA TCCATCAACA
GGATTGAACA GCGGATCGGG TTTGATGAAC CAGGACTTCA AAATTGTCAT TGAATCACCT
TCGGGAAAAT ATTTTAAAAT GACCAAAGAC GATCCCCTGA AGCCATTCGG AACATTCGCT
GCTAACATAA AATGTACGGA GCTTGGTCTC TACCGTGGGC TCGTTATTGG TGATAGTGGT
AACAGTTGGT ATGTTTTCAC TCAATGGGAA AGTGTCCCAG GTACGGTCAC CAATTAGGCA
TTTCATCATT CTAATAATCA TTAAAATCAG TCATATAAAA CAAAAAACCA CCATAACGTC
ATTTAGTTGT TTCTTTCTAT TCACATCAGC ATAATAATCT ACCTACATAT ATAATTAATC
ATTTGCATTT GAATAAACAT CTTTCAT
 
Protein sequence
MENYETGSDL NDLISDVSVK FNNSKVSQIR CVLLHLCKFR IIEESSKILT TKPKLNEVLH 
LGEASVYQLC YLLKKILDAL RIPAEVVLGF WKKPNEFYHN EQYVINHSWL SILLDSKFYI
LDLYNFKNGS VCNIRENAEG FNEFYFLARP LSVVSTHIPS VIDLQHVLPP IDPSIAFYLP
RAYSGFYRSG LKFRNFNNAL TRLRDLEFFE LELNIPVDVE LFTLVKTSKV TTNELSLCQI
QWNNNKKIAK IKAILPEGES IGVLQIFAGP KGLQKHFDNI HELAVVIPLY HTGDYKPSKF
IPRFPTVQSQ NNDLYVRQPQ TNKIIVKNAY NFEIDSYPST GLNSGSGLMN QDFKIVIESP
SGKYFKMTKD DPSKPFGTFA ANIKCTELGL YRGLVIGDSG NSWYVFTQWE SVPGTVTN