| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70126 |
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| Symbol | TAF122 |
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| ID | 4837589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2218865 |
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| End bp | 2220671 |
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| Gene Length | 1807 bp |
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| Protein Length | 568 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388904 |
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| Product | TFIID subunit (TBP-associated factor) |
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| Protein accession | XP_001383186 |
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| Protein GI | 150864396 |
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| COG category | [K] Transcription |
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| COG ID | [COG5624] Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.846732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CATTTTTTCT TCCATATACT TCCATATATC CATTTATTTC ATCCACACTC CTCACAATGG
AGTCTACAAA TGCTCCCGAT TCCGCACAGC CGAGCCCGGA TACGGGTGGA TTGTCAGGTT
CTGCTTCGGC TACAGCTAGT GTATCCATTT CCAATGCTTC GACAGGGACG TCCACGCCGC
TGATTCCCAA CATTGAGCCT AATCAAGCAG CACAACTAGC ACAGCGGTTC ACCAACGAAA
TAGAATTGGC TAAGGCCGCG GGATCTGATG TGGAAAAAGC AAAACAGCAT TACCAAAAGG
CAGAATCGAT AAAGCGCATC TTAATCTCAT ACAGAGCGCA GAAGAAAGCC AAACAGGATG
CAGCAAATTC TTCAGCGAAT GCTGATTCCA ACACAAACTC GAATGGTAAT TCTAATTCAA
ACTCAAGCAC TAATTTAAAC TCTAGTTTGA CAAATAATCC TTCAAATCCA ACTACTTCAA
ATGATTCAAA TGCTTCATCG GCTTCAAAAT CCATAAGTGC AGTACAATCA CCTGCTTCAG
CAATCCAATC TCCAGTTCCA GTTCCGTCTG TGGCGCTGCT TGCGGACACT TCTAGCCAAT
TACCACAAGT ATCCAGACCA CAAACTCCGA GTGAAATCAA TACCAAAGCT GTCACTATTG
ATCTTTTCAA CCAGGTCAGA TCGAGTTTGC AAGATTTACT TAAAAAGATT CAAGTTCTAG
AAGATTCGAA AACAGCCGAA ACAGACCCAA CTAGAATTGA AAGCACCAAT ACCGAATTGG
CAAAATTGAA ACCAAAAGTT TCTCAGTACC AGAAAATCGC CGTATATATG AAAAACCAAC
TTATACAACA AGGAAAGCTC AGTGCTAACG GCGGGCCACT TTCACAAGCA ATGTCAAGCC
AACCGTCACC GTCACCTGTC AATAGCACGA GACCTTCTAC TGGTGAAAAC ACTCCAGTTG
TTCAACCTTT AACGCTGAAA ACAGATCTGA AACCAGAAAT ATCAAACAGC AAACTCTCCA
ATGATTCCAA GTTTGTAGCA CCTGCTTCTT CAGACCAGCC TGGTGCTCAA TCTGGAGTTC
AATCCTCGTC TTTTGTGGCT GCTAGAACAG GGCCCTTAGG TTCGTTGACG AATCCTATAG
ACTCTTCAAC TCAAAGACCT CAGCCATTCA CGGCTACTTC TTCCTATTCA GCTTTAGGAA
GAGCAGCTAT TCCCACATCT ACAAGTGCTG CAAACTTGAG AACAACTAGT TCTTTTGTTT
CCAGACCAGG TATAGGTAAC GGTATTCGTC CTGGCTTGGG AATGCACTCG GCTACAGATT
TCAACTCGTA CTCCACCTTA AGCAGCATTC ACAGCAACAC TTCTTCCAAT TTCTCCGACA
ATGGTGGCAG AGTATTGACA AAGAGGAAAC TCGTAGATCT AGTCAACAAC ATTGGAATGG
ATGAAGGTGA TGCCAAAACA ACTATGGACA ACGATGTAGA GGAAATCTTG CTTGACTTGG
CCGATGAGTT CATCTCGTCT GTCACAGGAT TTGCCTGTCA GATAGCCAAA CATCGTAAAG
TAGACAAAGT AGACATCAGA GACTTTCAAC TTCACTTGGA GAGAAACTGG GGCATAAAAG
TTCCTGACTT TTCGCTTGAT GAAACGAAGT CTGTAAGAAA ATGGACTCCA AGTGCTGATT
ATGCAGCCAA GGTGTCGGAA ATCGAGTCTG CACAGTCCAA TGGCAACGAA ACTTCAAAGG
TAGACTTTTC TTCCAAGAAG TAAATGTAAC GAACCAAGAT TTTGTATATT ATGAACATCT
TTGTATA
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| Protein sequence | MESTNAPDSA QPSPDTGGLS GSASATASVS ISNASTGTST PSIPNIEPNQ AAQLAQRFTN
EIELAKAAGS DVEKAKQHYQ KAESIKRILI SYRAQKKAKQ DAANSSANAD SNTNSNGNSN
SNSSTNLNSS LTNNPSNPTT SNDSNASSAS KSISAVQSPA SAIQSPVPVP SVASLADTSS
QLPQVSRPQT PSEINTKAVT IDLFNQVRSS LQDLLKKIQV LEDSKTAETD PTRIESTNTE
LAKLKPKVSQ YQKIAVYMKN QLIQQGKLSA NGGPLSQAMS SQPSPSPVNS TRPSTGENTP
VVQPLTSKTD SKPEISNSKL SNDSKFVAPA SSDQPGAQSG VQSSSFVAAR TGPLGSLTNP
IDSSTQRPQP FTATSSYSAL GRAAIPTSTS AANLRTTSSF VSRPGIGNGI RPGLGMHSAT
DFNSYSTLSS IHSNTSSNFS DNGGRVLTKR KLVDLVNNIG MDEGDAKTTM DNDVEEILLD
LADEFISSVT GFACQIAKHR KVDKVDIRDF QLHLERNWGI KVPDFSLDET KSVRKWTPSA
DYAAKVSEIE SAQSNGNETS KVDFSSKK
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