| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70098 |
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| Symbol | |
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| ID | 4837153 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 205470 |
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| End bp | 207461 |
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| Gene Length | 1992 bp |
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| Protein Length | 597 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388468 |
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| Product | predicted protein |
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| Protein accession | XP_001382274 |
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| Protein GI | 150863712 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5384] U3 small nucleolar ribonucleoprotein component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.417891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.628267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG ATTTGTTGGA GACGTTGAGG AATAATCCTC AGGAAATCTT CGAGCTCTAC
AAGCCCAAAG AGTCTGATGA GACCTCATCG CAGAATATCT TCAACGAGAT GACCAAGACC
TTCTTGGACC CGTTCACCAA AAAGTATTCT GTTTTGGACG AAATATACGT TGATGGTTTA
GATTCCAGTC AAGTTTTTGG CCAGACGAAA ATGGTTTTGG ACGGGGTTGG AGAAACACTT
CTTGCTTCTG TGATTCCAGA GTTGAAGGAG AAGTATGGAG TAGCACAGGA AAGCGAGCCA
GAAGACGAGG AAGACTCTTC CAGCGATGAA GAAGGAGAGT TTGGTATCCC AATCGAAGAA
GAAGAAGACT ACTTGGATGA AGAAGAAGAA AAAGAAGAAG AAAATGACGA ACTTGAAGCT
GAGCAGAGTC TTGATGAAGA TCAAAAGGAT GAAGATCAAG AAGATGAAGA TCAAAAAGAT
GATGAAGAAG AAGAAGAGCA AGATATTCCT GTCAAGAAGG ATGTATTTGG ACTTAACGAC
GAGTTCTTCG ACATCGATGA ATACAACAAA CAAGTGATGA AGTTAGAAGA AGCTGCCGAG
AACGATGACT ACGACGAGAA GGAAGAAGAA ATCGACTATT TTGCAGCTTT GAGTGATGAA
GATGAGGAGG AAGAAGAGGA GGAAATGGCA TACTATGATG ACTTCTACGA CAAACCCGGA
AGTTCGAACA AGTTATCTAA TATTAAAGAC CATGAAACAA AAGAAGAAGA GGAGGAGGAG
GAGGAAGAAG AAGAAGGAGA TTTCAGTGAA GGAGAAATAG ACAACGCCAT GGGTTCGGCA
ATGTTGGACC TATTTGCTGA CGAAGTCGAT AATGAAGAGG TCTCTTCCAA GAATGAGAAA
ACCATGTCCT CTTTCGAGAA ACAGCAGCAA CAGATTCAAG CAGAGATAGC TAAATTAGAG
GCAGAACTTG TAGCAGATAA GAAATGGACT ATGAAGGGTG AAGTTGGCTC TAAAGACAGA
CCACAGGATT CTCTTCTTGA TGATCCAGAG TCTGCAAATA TGGCTTTTGA CAGAACGTCA
AAGCCTGTAC CTATTGTTAC ACAAGAGAGC ACAGAAGCAT TAGAAGATTT GATTAGACGC
AGAATCAGAG AAGAACAATT CGACGAAGTT CCAAAGAGAT TAGTAGCCGA TGTGGCTAGA
TTCCACAACA AGCAGAAATT TGAATTGTCT GAACAAAAAT CAAGTAAGTC ATTGTCTGAA
ATGTATGAAG ATCAGTACAA AAATGTTGAT ACAGAAAAAG AAGTCAGTGA AGAAATCCAA
AAGCAGCATG ACGAAATAAC AGAGCTATTT ACCAAGGTAA GCCACCGGCT AGACGCTCTT
TGTTCGGCAC ATTTCATCCC CAAGCCTCAT CAATTTAAAA CTATTGAAAT CAAGGTCAGT
GACAATGCCG CCTCAATTAA TATGGAAGAC GCTCAACCAT TGCATGTTTC GAGTGAATCC
ACTTTGGCGC CTCAAGAAAT ATATAAGATT GGCGATGACA AGCCTGTTGC GAACGGAGCT
AAGGGTAGAT CTGAAGTCCA ATTAAAATCT GGTTTGTCAT TCTCCAAGGA TGAGTTATCT
AGAGAAGACA AGCAGAGATT GAGAAGAGCC AACAAAAGAA AGAGAGCTAA GGAGTTCAAC
CAAAGAAAGG AATTACAAGA ACAGAAACAG AAGCAAACCG GTGCTGCTCC AGCCAATAAA
CGCCAAAAAG TGGGCGAGGT TATCAATACA TTATCTAAGG CTAAGAATAT CACTGTTATT
GGCAAGAAGG GAGAAATGAG AGATGTAAAG GGTAACGTGA AAAAGCTGCA AGGGGCACAA
ACTTCGAACA ACTTTAAGTT GTAGAGAAAA CATGAATAAT TTAATGCATA ACTGGCAGCT
GCCAGATATT TTATAGCGTG TATAATATTT GTATTCATAC AAAACAACTA TATTTGACAG
AAGAATTACT TT
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| Protein sequence | MSQDLLETLR NNPQEIFELY KPKESDETSS QNIFNEMTKT FLDPFTKKYS VLDEIYVDGL
DSSQVFGQTK MVLDGVGETL LASVIPELKE KYGVAQESEP EDEEDSSSDE EGEFEEKEEE
NDELEAEQSL DEDQKDEDQE DEDQKDDEEE EEQDIPVKKD VFGLNDEFFD IDEYNKQVMK
LEEAAENDDY DEKEEEIDYF AALSDEDEEE EEEEMAYYDD FYDKPGKEEE EEEEEGDFSE
GEIDNAMGSA MLDLFADEVD NEEVSSKNEK TMSSFEKQQQ QIQAEIAKLE AELVADKKWT
MKGEVGSKDR PQDSLLDDPE SANMAFDRTS KPVPIVTQES TEALEDLIRR RIREEQFDEV
PKRLVADVAR FHNKQKFELS EQKSSKSLSE MYEDQYKNVD TEKEVSEEIQ KQHDEITELF
TKVSHRLDAL CSAHFIPKPH QFKTIEIKVS DNAASINMED AQPLHVSSES TLAPQEIYKI
GDDKPVANGA KGRSEVQLKS GLSFSKDELS REDKQRLRRA NKRKRAKEFN QRKELQEQKQ
KQTGAAPANK RQKVGEVINT LSKAKNITVI GKKGEMRDVK GNVKKSQGAQ TSNNFKL
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