| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_70077 |
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| Symbol | THI20 |
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| ID | 4837639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 427321 |
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| End bp | 429280 |
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| Gene Length | 1960 bp |
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| Protein Length | 583 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388954 |
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| Product | Phosphomethylpyrimidine kinase THI21 (HMP-phosphate kinase) (HMP-P kinase) |
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| Protein accession | XP_001382844 |
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| Protein GI | 126132638 |
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| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0819] Putative transcription activator |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.583202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCTTTTCCA TTGTTCTTAC CATTCAATAC AGGCATCGTG TTGAAAATGA CAACATTTTC
TGTGGTGAAA TTGAGAACTC CCACTGTCAA GTCCAAACCA GTCCTACCAG CTGTATTAAC
TATAGCAGGA TCCGACAACT CAGGTGGAGC CGGCATTGAG GCCGACTTGA AGACATTCAG
TGCCCACAAG GTTTACGGGT TGACTTGTAT TGCTGCTTTG ACGGCCCAAA ATACACAATT
GGTGAAAACA TTTGAAAAAA CTCCAAAAGA ATTGGTTAAA AACATCTTGC AGCTCAACTT
TGACGATTTC CTCTACGGAT ATGAAGACAG TACACAGCCA TTGAAGGTCA TCAAGACTGG
GATGCTCACA GAAGAAGCTG TTCATGTTAT CCAGGACTTT CTACCAGACA TCAAGAAACA
CAATGTGAAA CTAATAGTCG ACCCAGTGAT GATCAGTACT TCTGGATCCA GTCTTTTTGA
TAGCGAAGGC ATGAAGCTTT GTGTGAATAC CTTGATCAGT GGAGCCTATT TGATCACACC
TAATTTTGTA GAAGCCAGAG CACTTTGGGA GATTGCTTGT GGAGAAAGTG CAGCTATCGA
GAAGCTCACT ATCAACTCTT TGGATGACTT TATAGACTTT GTCAAGCAAT TGCAGAAGAC
CCTCAAGTCA CAGAATGTTT TAGTAAAGGG TGGACATATT CCTTGGGATT CCCGAACGGG
CAAGCCATTT GTTGGAACCA ATCTTGCTGA TGTTGAAGAC AGTATTGTTG TTTTGGATGT
GTTATATGAA TCTGAAATTG ATAAGGCGAC TGTGTTTGAG TCCAAGTACA TAAATACCAA
GGATTCACAT GGAACCGGTT GCACTCTTGC TTCAGCCATA TCTGCAAATG TAGCCAAGGG
AAAGAACTTG AAAGAAAGTA TCTCTTTATC CATAGACTAT ATCCACAAGG GAATGTTGAG
TGTAGGCAAG AAATTGGGAT ATGGAAATGG ACCCTTGAAC CACAATGTGG AACCCGAAGA
AAATCTAAGC AATGTCATCA TTGGAAACAG CACAGACACA TACATGAGCG TTAAGAAAGG
GAACCAGTCT TTCTTTGAGT ACTTCAAGAC CCATCCTAGT GTCAAGGAAA GCTGGAAGCT
CTACACTGAG CATAGATTTA TCCAGCAATT GGCTCAGGAC AAGTTGCCAT TCCAGCGCTT
CCTTTACTTC TTGAAGCAAG ATTACTACTA CTTGATCAAC TATGCACAGA TGCACGGGTT
AGCGGCTTCA GTCGCACCAA CATACCATCA AACCCATGCC GAAGCACTTA TCATAGGAGA
AGTCATCACT GAAATTGAGA AGCACAAGGA AAAGCTTTCC AAGAAATACG ACATTGATTA
TGAAAGAGAT ATTGATTTCG ATATCGAGTT GCAACCTGGA AAGGCATGCG TGGACTACTG
CAACTATCTC TTGGAAATTG GAAATAGGGA GAATTTCTTG GGTATCAAGG TAGCTTTGGC
TCCTTGTTTG CATGGATACG CTGAGGCTGG GTTGTATGGT AAGAGCATCA GAGAGAGCTA
TGACAAGAGT ACCTCCAGCT TGGATAAGGT ACTTTCTGAA ACCTACGACA CGTGGTTAGG
AGACTATAGT TCCGAATGGT ATTTGAACGC TCATAAAGAA GGAGAGGCTA CGCTTCAGGA
GTTGATGGAA TCGAACGACG TTTCAAATGA GAGAATGGAC GAACTTGTTG AGATTTTCAG
GAAGGTGACA GAGTTGGAAG TGCACTTTTG GGACGAGGTC TTGGATGTAT TACCATAATT
GTTGGTGAAC ATCATGAGTT GTAAGTTCTG ATGCAATAAC ATAGACTATG AAGTGTTCAC
GAGTCTCTCT AAGAAAGTAT TTCGATAGAG AAGATTGAAG TGCAAAGAAA ATAGAAAATG
TATAGAACTG TTTAACAAAT TGAATATAGA AAAAGCGTGG
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| Protein sequence | MTTFSVVKLR TPTVKSKPVL PAVLTIAGSD NSGGAGIEAD LKTFSAHKVY GLTCIAALTA
QNTQLVKTFE KTPKELVKNI LQLNFDDFLY GYEDSTQPLK VIKTGMLTEE AVHVIQDFLP
DIKKHNVKLI VDPVMISTSG SSLFDSEGMK LCVNTLISGA YLITPNFVEA RALWEIACGE
SAAIEKLTIN SLDDFIDFVK QLQKTLKSQN VLVKGGHIPW DSRTGKPFVG TNLADVEDSI
VVLDVLYESE IDKATVFESK YINTKDSHGT GCTLASAISA NVAKGKNLKE SISLSIDYIH
KGMLSVGKKL GYGNGPLNHN VEPEENLSNV IIGNSTDTYM SVKKGNQSFF EYFKTHPSVK
ESWKLYTEHR FIQQLAQDKL PFQRFLYFLK QDYYYLINYA QMHGLAASVA PTYHQTHAEA
LIIGEVITEI EKHKEKLSKK YDIDYERDID FDIELQPGKA CVDYCNYLLE IGNRENFLGI
KVALAPCLHG YAEAGLYGKS IRESYDKSTS SLDKVLSETY DTWLGDYSSE WYLNAHKEGE
ATLQELMESN DVSNERMDEL VEIFRKVTEL EVHFWDEVLD VLP
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