| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69919 |
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| Symbol | |
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| ID | 4836862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2262832 |
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| End bp | 2265931 |
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| Gene Length | 3100 bp |
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| Protein Length | 861 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388177 |
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| Product | predicted protein |
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| Protein accession | XP_001382662 |
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| Protein GI | 126132274 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5594] Uncharacterized integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.634298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0404263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGCAGTCTA GACGTAGCTT TCTCTTTGAT CTGCTAACAG AACCCAGATT GTGCATTGGC
AGTGTAACTA TACTCATTGC TTCTTTTGGC ACTATCCTTG AAGCTATCTT GGGCGCTATT
CATTATTGTA GCTGCCTTTG CAACTCATTA CCAGTATTGC TTGATACAGC TGACCATTGC
TATACCAAGC GATAAAATCT ACTGCTCGTT ACAAACTAGT GGCTTGTAGC AATACTTCAC
AGTTGGCCTA TTGTACCCCC CCAGAAAACA GGATCTGATA TCGCTAACAT CCCAAAATCA
TGGCATCCAC AGCTACTTCC ACCTCCGCGG TGCTTTCTAC GTTAGTGGCC AACCTCATTC
TTTTTGGTAT CTTCATCCTA GGTTTCTTGA TCCTCAGATT GAAGTACAAG AGAATCTACT
CCCCAAAATC GTCGTTCGAG CTCGTGCCCG AGGACCAACG TCCCGAGCCG TTGCCTAGGG
ACCCATTCAG ATGGATTTTC ATTCTTTTAA CCAAGCCCAA CTCATTCATT ATCCAACAAG
CAGGAATTGA TGGCTACTTC TTCTTGAGAT ACGTCTTCAG CTTTGCCTGT GTCTTCTTGG
TAGGAATGCT TACCTGGACT GTCTTGTTGC CTATAAATGC CACCAACGGT AAAGGTGCCA
CTGGATTAGA CCAGTTGGCC ATCTCTAACG TCAAGGACAG AAACAGATAC TATGCTCATG
TGTTTATTGG CTGGGTTTTC TACGGTGGAG TCATCTTCGT CATCTACCGT GAATTGTTCT
TGTACAACTC CTTGAGATCT GCCGTTCTTG CATCCCCTAA ATACTCCAAG AAGTTATCGT
CGAGAACTGT TTTGTTCCAG ACTGTCCCAG ACTCGCTTTT AGACGAGAAG CAATTGTACA
AGATGTTCAA CGGTGTCAAG AGAATCTTCG TAGCCAGAAC TGCTAGAGAC TTAGAATCTA
AAGTGGCCAA GAGAGACGCC TTGGTCAAAC AGTTGGAGAA CGCTCAAAAC AAGTTATTGG
CAACAGCTGT CAAGAACAAA ATGAAAGCTG AAAAGAAGGG CCAAAAATTA GAACCTGTGG
ATGAAATCTC TGCCTACGTG CCTCAAAACA AGAGACCTCG TCACAAATCC GGCGGTTTTT
TCTCCAAGAA GATCGATACT ATTAACTACT GCAAGGAAGA AATCCCTAAA ATCGACAAGG
AAGTCAGAGC CATGCAAAAG AAGTTCAGAA CTAATAGACC CAAGAATTCT ATCTTTGTTG
AATTCGAAGA CCAGTACCAT GCTCAGTTAG CCTACCAAGC TACTGTGCAT CACAACCCGT
TGAGAATGAA GCCTGTTTTT ACTGGAGTTG AACCAGGTGA CGTTCAGTGG TCCAACTTAA
GAATGTTCTG GTGGGAAAGA ATCACTAGAA GATTCCTTGC TTTTGCTGCT GTAGTTGCTT
TGATTATCTT GTGGGCCGTC CCCGTAGCTT TTGTCGGTGT CATCTCTAAC ATCACTTACT
TGACTAACAA GTTGCCCTGG TTGAGATGGA TCTTGAACAT GCCTCACTTC TTGTTAGGTA
TTATCACCGG TTTATTGCCT GCCATCATGT TGGCACTCTT GATGATGATT TTGCCTATGT
TCATCAGAGG CATGGCTAAG ATCGCTGGCG CCCCAACTTA CCAGGCTATC GAATTGTACA
CTCAAAACGT CTACTTTGCC TTTTTGATGA TTAACGGTTT CTTGGTTACT GCTCTTGCTT
CATCAGCTAC TTCTACCGTT ACACAGATCA TTGAGGAGCC AACTTCTGCC ATGAGCATTT
TGGCTAACAA TTTGCCTAAG TCTTCTAACT TCTACATTTC GTATATTATC TTGCAAGGTT
TATCCGTTGC GTCTGGGTCT CTTTTCCAGA TTGTAGGTTT AATCTTGTTC TACCTCTTGG
GCAGACTTTT GGACAACACC GTCAGAAAGA AGTGGAACAG ATTCAGCGGC TTAGGATCCA
CGGCTTGGGG TACTACTTTC CCAGTGTTTA CCAACATTAC TTGTATTGCA CTTATCTACT
CCATTATCTC ACCTATGATC ATGTTATTTG CTTGCGTTGC CTTGTTCTTG ATCTACATCG
CTTTCTGCCA CAATTTGACT TACGTGCTTA AGGAAGGCCC CGACACCAGA GGGTTGCACT
ATCCAAGAGC TCTCTTCCAG ACTTTTACTG GTATTTACAT TGGTCAGGTT TGTTTGTTGG
GTATCTTCGC TGTCGGTAAA GGTTGGGGAC CAATTGTGTT GCAGATTATC GGCATTTTTG
CAACTGTGTT CATCCACATC AACCTTAACG AGTCGTTTGA TCACTTGCTC CAGGTTGTTC
CTATCGACTG TATGAGAGCC TTGGACGGTG TTTCTCAGAC TGCTTCGTTT ACCGGCTCTA
GTGAATACAA GAGAAAGGTA TTGGACAGAA AGACAGGTGC TGGCAAAACC GAAAAGGCTA
TTGCTGAAGA CAAGGAAGAA CAAGAGCAGA TCAAGCGTGA TATCCTTCAA GAAGATGGCG
AGTTCAACGA TGGTGAAAAC GAGAGAACTC TCATTCCGTT ATTGGCTGAC AGGGACTTCA
AGACAACTGA GTCTCAAAAT GTCTTTGTTC GTTTTGTCAG ACCAGACGTG TTCTTGAACT
ACAGGCATGC CAAGCAGCAA TTACCTGCTA CATACAACAT CGAACCTGAA ACTGAAGATG
ATAAGCATGC CTACGATATG CCTGTCATCT CGGCTCCATT GCCTGGAATA TGGATTCCAG
CTGATCCTAT GGGATTCTCC AAGCAACAGA TTGAAGAGTT CAAAGGTATT GTCAGCATCT
CTGACGAAAA CTCGGGCTTC GACGAAAAAG GTGCCATTAC CTTCCTCGGA GAAGCTCCTA
ACTAGGCTAT TTACTAGTGG TTCATGTTTG TTTTATAATG GAAAAGTGTT TGATTTGGTC
GTTAATTTTC TAGACTAGAA GAAGACAATT GTATATATGT TTCTCAATAT AGAAAGAAGC
TACAATTAAT GTAATTTAGG CCGTATTGTA AACTAGCCAA AATTGTCTTA CTTCACTACA
TCTTCTTTAC ATCTCTTCCA ATGCTACAAA TATTTCTTGC
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| Protein sequence | MASTATSTSA VLSTLVANLI LFGIFILGFL ILRLKYKRIY SPKSSFELVP EDQRPEPLPR
DPFRWIFILL TKPNSFIIQQ AGIDGYFFLR YVFSFACVFL VGMLTWTVLL PINATNGKGA
TGLDQLAISN VKDRNRYYAH VFIGWVFYGG VIFVIYRELF LYNSLRSAVL ASPKYSKKLS
SRTVLFQTVP DSLLDEKQLY KMFNGVKRIF VARTARDLES KVAKRDALVK QLENAQNKLL
ATAVKNKMKA EKKGQKLEPV DEISAYVPQN KRPRHKSGGF FSKKIDTINY CKEEIPKIDK
EVRAMQKKFR TNRPKNSIFV EFEDQYHAQL AYQATVHHNP LRMKPVFTGV EPGDVQWSNL
RMFWWERITR RFLAFAAVVA LIILWAVPVA FVGVISNITY LTNKLPWLRW ILNMPHFLLG
IITGLLPAIM LALLMMILPM FIRGMAKIAG APTYQAIELY TQNVYFAFLM INGFLVTALA
SSATSTVTQI IEEPTSAMSI LANNLPKSSN FYISYIILQG LSVASGSLFQ IVGLILFYLL
GRLLDNTVRK KWNRFSGLGS TAWGTTFPVF TNITCIALIY SIISPMIMLF ACVALFLIYI
AFCHNLTYVL KEGPDTRGLH YPRALFQTFT GIYIGQVCLL GIFAVGKGWG PIVLQIIGIF
ATVFIHINLN ESFDHLLQVV PIDCMRALDG VSQTASFTGS SEYKRKVLDR KTGAGKTEKA
IAEDKEEQEQ IKRDILQEDG EFNDGENERT LIPLLADRDF KTTESQNVFV RFVRPDVFLN
YRHAKQQLPA TYNIEPETED DKHAYDMPVI SAPLPGIWIP ADPMGFSKQQ IEEFKGIVSI
SDENSGFDEK GAITFLGEAP N
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