| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69889 |
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| Symbol | SMX1 |
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| ID | 4837024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 552507 |
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| End bp | 555688 |
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| Gene Length | 3182 bp |
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| Protein Length | 1004 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388339 |
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| Product | Importin-beta like gene |
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| Protein accession | XP_001382866 |
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| Protein GI | 150864152 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5656] Importin, protein involved in nuclear import |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.574805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.668272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCGAAATCGC TAGCACTTCG CTGAAAAATC ACCAATTTTT CATTCATATT CAGCACTATA
CAGCTATAGC ATAATTTCAC TATGGACAAA CCCAGTTTAC TCAAGGCTTT GGCCGGCACA
TTGGATGCAG ACTTCCACAC CCGTAAACTG AGCGAAAGAC AGTTGAACGT CTATGAACAG
CAACCTGGCT TCACAGCCTA CTTGCTAGAG CTCATTACAG ACCCCGAGGC CCAATTGGGC
ATCCAGATTT CAGCAGCCAT CCTCTTCAAA AACAGAGTCA TGACCTATTG GTTGACTCCG
GAAAACAAGG CTCCCAGTCC GTTGACTATC AGAGACAACG AAAAGCCTCA GATCAAGGAG
AAATTGATCC AGACTTTGAT AAAGACCTAC AAGAACACCC AGCTCAAATT GCAATTGTCT
ACAGCCTTGC ACAATATCTT GAGTTCGGAA AAATGGGATG AAATACTTGC TATCATCAAG
AACTTGTTGA ACGACCTGTC CAATATCGAC CACGTGTACG TTGGCTTGAT CTGCTTGTAC
GAATACACTA AAAACTACAG ATGGTCTAGC TTTGAACATG CAAATTCTTC TAATCCAGTG
TTGGAAGATG TAGCCAATGA AGTATTCCCA CAATTGCAAA CTCTTATTCA CAATTTGATA
AACAGCGACT CAGCTACTGC TGACGAGATG ACGTACTTGA TAGTGAAGAT CTTCAAGTTT
ACCACTTTCT CATCTTTACC ATCGTACTTC TTGAACACGG AAAATTTGGG CAACTGGTGT
CAGATCCACA TCATGATCAT CAACAAGCCA TTGCCAGCAT CTGTGTTGAA CGAGGACTCA
ATTGAGCTTA GAAACCAGAA CCCTAGGATT AAAGCTGTGA AGTGGTGTTT CGGAAACTTG
CACCGTTTGT TGAGTCGTCA TGGTGGAGGT ATCACAACGA AAGATAAAAC TAACAACCAG
TTTGCTACAG CTTTTTTGGA GAACTTTGTT CCAGTCATCT TGAACGCGTT TTGGAAGATC
ATCGAAGAGT GGTCCACCAA ACAAATCTGG TTGAGTGAAT CTTCTTTGTA CCATATCATT
TCGTTCTTGG AACAGATTGT AGACACGCCA GCCTGGAACT TGATCAATGA CAAGATCGAT
GCTATCATCA AGCACGTTAT ATTGCCCACA TTGAATGCAA CAGAAGAAAC CATAGAGTTA
TACGAAGACG ATTCTGACGA GTACATCAGA AGATTCTTTG ATACCAACCG AGAAAGCAAC
ACGGCAGATG TGGCCTCCAT CAACTTCATC TATCGTTTGT CTGTCAAGCG GTTTACTGCC
AGCATAAACA CCGTGTTAGC CATCGTAAAT GATATCTTCA ACCGTAGAGC CGGCGATCGT
GGCAATGTAG ACGTGGCCAA GGAGACTGAA GGTGCATTCA GAGTATTATC TACTCTTTCC
CATAAGTTAG ACAACAAGAA CTCGCCAGTC CACGGACAAG TAGATAAGGT GTTACATACA
TTCATCTACC CCGAGTTGGC CGAACCTGTT ATTGCTTCGA CTCCTTGGTT GACAGCTAGA
GCCTGTGACA CTTTGGCCAT GTTTAGACAC AATTACAAGG ACCAAGAAGT GTTGAGAGAC
ATTTTCCAGG GCGTGGTCAA CTGTTTCCAG AAGGAAGACC AGTTTCCCAT TCAGCTTACC
GCTGTGGATG CCTTGTGCAC TTTGGTAGAA GAAGACACCG TAGCTGAACA TGTAGGAGAA
CAGGCTCCTC AGTTAATGGG GACCTTATTG GAGATGTCTA AGAAGTTCGA GAGTGACATT
TTGACAAGCG TAATGGAAAC ATTTGTCGAA AAGTTCGCTA AGAACTTGGA ACCATATGCA
ACAGAGTTGG CCAGAAAGTT GATGGAACAG TTCCTCAGAA CGGTATCCGA GTTGATGGAA
CAACAGTCTG CTGACTATAA CAACGTAGAC GTGGACAAGG AATACAAAGC AGCAGGTGTA
TTGGGTACCT TAACTTCGTT GGTGATTGCC ATGGGTACTT CTCCTGAAGT GTCTGTAGCC
TTGGAAGGAG TATTACTGGA AATGATTATC TTTATTCTCG AGAATGCACA AGTTTCCTTT
TTGTGTGAAA CCATCGAGAT TCTCGAATCA TTGATTTTCA GCTCTCGTAA CGTTTCTCCT
GTCATGTGGA ACATTTACCA GGTTGTCATT GATTCATTTG ATACATATGC ACACGAGTAC
TTCGACAGTT TCCAGCCGTT CTTCGAAGGT ATTATTAACC ATGGCTTTAC TCAACCTGTA
ATCACTGTGG AGAGTCCTCA AATCCAGCAA TTACTTTCAG TTTGTTTCAA GCTCTTGAAG
AGCGACAGCT TGGATCCCGT ATTTGCTCAC TCTACTTTTG AAATTATGGA GTTGACCATC
TTGGCTTTGA ACACGAGATT CGTGCCAATC TTGCCTCAGT TTTTACCTGA GATTTTCGAA
ACCTTCAGTT CATTGGAGAG CCAGGATGCT TTCGATGGCT ATATGTTGCA CCACTTGTCA
ATTTTGAGAG TTTTCTTTGC TGCATTCTAC GTAGACCCAG TCACGACCAT TCAATTCTTG
AACGAAAAGG GATTCACGCC AGCCTTGTTC CAGTTATGGA TCAAGCACTC AAGTGACTTC
CAAAGTGTAT ATGGATGCAA GTTGCAGATT TTGGCCAGTA TTTCCATCAT CAGAAGCCAG
GCTTTGACCT TGATTCCCGA AGATCTTATT GGCGAAACCG TTGATTTAAT GGTAGACAAC
ATTTCCACCT TGCCATCAGC CATCAAGGCC AAAAACGATA TCTTGCAAAA AGAAAGCCTG
AAACCTTTTG GTAATGCTGG TAATGAAGAA GAAGATGACG AATACAATGC TGCTTACTAT
GAAGACGAAT TGGAGGCAGA CGAAGCCGAA TTGGAAGCAT TGAAGCAAAC TCCTATCGAC
GAAATCAACG TTTTCCAGGT AATTGCTGAC AACTTGCAAA CCATGATCCA TCAGGATCCA
GGCAAATACG AGGCATTGTT CGGAGGTGTT AGCGACAACA AGAAGGAGAT GCTCCAGCAG
ATCTTGCACA TTGTGCACGA AAAGGCCAAA AACTAGAGCC AAAGAATACG TAGTTTATTT
CCTCATACTT CTGTTTAAGC ATTTAGCCCT GCTAATAAAA GTCGCATTAT AATTTTGCAC
CC
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| Protein sequence | MDKPSLLKAL AGTLDADFHT RKSSERQLNV YEQQPGFTAY LLELITDPEA QLGIQISAAI
LFKNRVMTYW LTPENKAPSP LTIRDNEKPQ IKEKLIQTLI KTYKNTQLKL QLSTALHNIL
SSEKWDEILA IIKNLLNDSS NIDHVYVGLI CLYEYTKNYR WSSFEHANSS NPVLEDVANE
VFPQLQTLIH NLINSDSATA DEMTYLIVKI FKFTTFSSLP SYFLNTENLG NWCQIHIMII
NKPLPASVLN EDSIELRNQN PRIKAVKWCF GNLHRLLSRH GGGITTKDKT NNQFATAFLE
NFVPVILNAF WKIIEEWSTK QIWLSESSLY HIISFLEQIV DTPAWNLIND KIDAIIKHVI
LPTLNATEET IELYEDDSDE YIRRFFDTNR ESNTADVASI NFIYRLSVKR FTASINTVLA
IVNDIFNRRA GDRGNVDVAK ETEGAFRVLS TLSHKLDNKN SPVHGQVDKV LHTFIYPELA
EPVIASTPWL TARACDTLAM FRHNYKDQEV LRDIFQGVVN CFQKEDQFPI QLTAVDALCT
LVEEDTVAEH VGEQAPQLMG TLLEMSKKFE SDILTSVMET FVEKFAKNLE PYATELARKL
MEQFLRTVSE LMEQQSADYN NVDVDKEYKA AGVLGTLTSL VIAMGTSPEV SVALEGVLSE
MIIFILENAQ VSFLCETIEI LESLIFSSRN VSPVMWNIYQ VVIDSFDTYA HEYFDSFQPF
FEGIINHGFT QPVITVESPQ IQQLLSVCFK LLKSDSLDPV FAHSTFEIME LTILALNTRF
VPILPQFLPE IFETFSSLES QDAFDGYMLH HLSILRVFFA AFYVDPVTTI QFLNEKGFTP
ALFQLWIKHS SDFQSVYGCK LQILASISII RSQALTLIPE DLIGETVDLM VDNISTLPSA
IKAKNDILQK ESSKPFGNAG NEEEDDEYNA AYYEDELEAD EAELEALKQT PIDEINVFQV
IADNLQTMIH QDPGKYEALF GGVSDNKKEM LQQILHIVHE KAKN
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