| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67118 |
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| Symbol | VCX1.1 |
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| ID | 4837577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2447981 |
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| End bp | 2449336 |
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| Gene Length | 1356 bp |
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| Protein Length | 416 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388892 |
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| Product | Ca2+/H+ antiporter |
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| Protein accession | XP_001383222 |
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| Protein GI | 150864418 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.112466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.866268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACCT TGAATGAAAA CCTCGCCTTA CTTGGTCGCT CCAACTCACC TTCCTTCAAG
ACTCGTGCCA TTGACACCCT TGTTCTCACC TTGAAGTCGT CTCCTGTTAA CTACTTGTTA
GTGTTTGTTC CCCTCGGTTT GGCTGCTGGA TACTTACAAT GGTCGGCCAA TGCCATCTTC
TGGATAAACT TCGTTGCCAT TGTGCCGCTC GCTTCCATAT TAGCCTTTGC TACTGAAGAA
TTGGCTGAAG ATGTAGGTGA GACAGTTGGT GGCTTACTTA ATGCCACCTT TGGTAATGCA
GTAGAATTAA TTGTCTCCAT CATCGCTTTG AAGGAAAATC AAGTCAGAAT CGTCCAAGCT
TCCATGTTGG GTTCCATATT ATCCAACTTG TTGTTGGTTT TGGGATGCTG CTTCATAGCT
GGTGGTATCA CCAGAGTTCA ACAGACCTTT AACCAAACTG TAGCCCAAAC TATGCTGTCG
CTCATGGCAC TTTCCACTGC CGGGTTGCTC ATACCCGCTG CCTTCCATGC TTCTTTGCCT
TCGCCAAAGC CAAAGAATGG CTTCCCCGAA CCAGGCTCGT CTGACGACTT GATTCTCTCC
TTGTCAAGAG GTGTCTCCAT CATTTTGTTG GTGGTATACA TTCTCTACTT GGTTTTCCAA
TTGAAGACCC ACAAGGCTCT TTTTGAAGAA CAAGCCCAAG AAGCAGATGA CGGAATCATA
ACCGCTGCCT TACCTCAAGT TACCGAAGAT TCCCAGAAGG AAAAAGGAAA GCACCTTAAT
GTCTTCAGTT CTCTTACTGT GTTGCTTTTG GCTACTATTC TTGTTTCGCT CTGTGCCGAT
TACTTGGTTG GTTCAATCGA CGACATCGTC GAGTCGTCTG GTTTGTCGAA AACTTTCATT
GGTTTGATTG TCATTCCTAT CGTAGGTAAC GCTGCCGAAC ATGTCACTGC CATCATTGTC
GCCATGAAGG ATAAGATGGA CTTGGCTATC GGAGTAGCCG TGGGCTCGTC TTTGCAAATC
GCCATCTTCG TCACTCCTTT CATGGTATTG ATCGGGTGGG TCATCGACGT TCCCATGTCG
TTGTACTTCT CTACATTCGA AACAGCTGTC ATGGTGGTTT CTGTGTTCAT CACCAACTTG
GTTATCTTGG ACGGTGAGTC CAACTGGTTG GAGGGCGCTA TGCTTTTGAG CACGTATTTA
ATTGTCGCTC TCGCCTTCTT CTACTACCCA GACGTCGGTA TTTCTAACTA ATATCGGCCA
CGAAGAGGTC TATCGTTTTT GCTACAAAAC GATAAATAGT CTTATCTAGT GTGTCCAAAA
TAGTGCATAA ATTGTAACTA CACAAAACGA TCATTT
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| Protein sequence | MPTLNENLAL LGRSNSPSFK TRAIDTLVLT LKSSPVNYLL VFVPLGLAAG YLQWSANAIF
WINFVAIVPL ASILAFATEE LAEDVGETVG GLLNATFGNA VELIVSIIAL KENQVRIVQA
SMLGSILSNL LLVLGCCFIA GGITRVQQTF NQTVAQTMSS LMALSTAGLL IPAAFHASLP
SPKPKNGFPE PGSSDDLILS LSRGVSIILL VVYILYLVFQ LKTHKALFEE QAQEADDGII
TAALPQVTED SQKEKGKHLN VFSSLTVLLL ATILVSLCAD YLVGSIDDIV ESSGLSKTFI
GLIVIPIVGN AAEHVTAIIV AMKDKMDLAI GVAVGSSLQI AIFVTPFMVL IGWVIDVPMS
LYFSTFETAV MVVSVFITNL VILDGESNWL EGAMLLSTYL IVALAFFYYP DVGISN
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