Gene PICST_67083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_67083 
SymbolFCR1 
ID4836999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2232418 
End bp2235119 
Gene Length2702 bp 
Protein Length609 aa 
Translation table12 
GC content42% 
IMG OID640388314 
ProductFCR1; zinc finger transcription factor 
Protein accessionXP_001382653 
Protein GI150863990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACTCTACAAG TGTACTATAA TTAGTACTGA CTCTGGCTAA GCTGGACATA CCTTCGAAGC 
ACTCGTCCGA GTAACTTCCG CCCCAGTAGT AGACATCTCA TCCTACCACT AAACCACACC
AATAGTCCCA GCTTAGTAAG GGACTGTTAA ATCCGAGTTT GAGAGTGCAC TAATACTGCT
TGTTATACCG ACACCTGTTC CTCCAGCAAT TGAGTTTTCT TATTAATAAC ACATCTGCTC
CTGATCAGAA GAATTGTATT TTGAACAATT GGTATAAGCT CGTATCAGTC TAAACCCATC
TCAATTCCAC TTTGAACTTT GTACTATCGT GTTCCACTAG TCGAAAGATA TTGCACCCAT
TAGTCAGAAT TGAGTTCGCC AGCTTCCTGG AGCACATGTA CATAATTGTC CAGTACTTCT
ATTATATCTA TTCAGTTTGT ACTTGACTTC GACAGAATGA ATCCTGTATC TCCTCCTTCA
CCTACAGACG AAGCCGGTCA CAGCACGCTA GGCATTTCGG CCAGCGGCAA CGTCGGCTAC
TCTTCGAGCC ATATCAAGAA AAAGAGAGTA GGAAAAGCTT GCGACTCCTG TCGTATCAAG
AAGACGAAAT GTGATGGTAA GAAGCCTTGC AACCGTTGCA TAATTGATAA CAAGATCTGT
GTCTTCACAG AAAAGAAAAA GCCCAAGGAA AAGAACCATC CTCAGGGCTA TGTAGAATTG
CTAGAAACTC GTTTGGATAT CTTGACCAAG TCATTGGAGA AGTTAATCGA GTTGAGTAGA
CCCAGTTTGC CTTTCTTGGA AGAAATACTC CAGGACGGAA AGAGAACCAG AAGAATGAAA
ACAGAATTCG AGTCTGACTC TAATGATGAA TTGCTGTCTG ATGAGGATAG TCAATCACCA
GGCACTCAGA CGAGGGTTAA AAAGGAAAAG GACTTTTCAA TTGACGAGCT TGACCACAAT
TCAACGGTTG TACCTGATGA GGACAGCATT CCTATAAATA GAGTCGTATC CTACCTTATC
AACAGCGAGG GCTTGCTTAA TAATTTGCCT GTAGAATGGG AAGCTGGTGC TATGCTAGCA
GCAAACTACG TTCCCAAGAA CATGGACAAG TACCTGAAGG TTTTTGCTGA ACACAAGTTG
AATGTCACAG AAAAGAATGA AATTGAAAAC CATAACCATA ACCATACAGA GTTCGGACCA
AGTCCAAGTA GCTTGGCTGT TCATCGGGAT CAACTTTTTC AACATTCACA GTTTTCTAAT
AAAAGACAAA ATAACCAAGT CGCTGTGAAG AGAGAAGACG ACCATCCGGT CTTGTACGAG
GATGGAGAGG ACATGGCAAT TACTTCTCCA ACAGCTTCAG CATTGCTGCA GACAAGTTTG
ACAGAGCAAT TGAACTTGAA CGAGTTCTCC CTAGGAGGTT TTTCCTCTGG GGGACTAGTT
GTAGCAGGAA CTGGACATTT TGAGAATGCC AACAATACCA ATAGTCTTTC TTCGTATGCC
TCTTCCAACA ACGACTTCAC CATGAGCGAC ATAGATACGG ATTCCGTTTC AAGTTATTCG
CAGGGCCAGC TTCATCATGG TAAGATGCCA TCGCATCAAA TCTCCCAGAT TCAGAATCAT
CAACTCCAAT CACAGAAATT CATAAAGAGC GCCTCAATTT CACCAGCAGA GATTGAAAAC
TTCCCTAGGA GAGCCAACTC TATTTTCTTG TCAAACTCGC AGGGTTGTGA AGGTCAACCA
CCTTCTTCCG TGACCAAGAG CGGTTCTATT TCTTCATTAA CTTCGAAATA CGAAAACCAC
AACTTGGCCA TGCCTGTCAG TTCAGCTACT CCACCTCCTG AAACCTTGAG AAGGTCAAGT
TCTTCATTGA TCCAACGTCC ATGTTCTCCT TCTCACCAAA AAGCAAAAAA CAGTGGTCAT
GTTCATAAAG CCCAATTCCA TCCCCATTCT CTGTCCAACA AGTCTAGTAC TTCTGGAACT
GTAGTCAGTA ATAATGGAAA TGAATTTCAT ATCAGTGGAA ACTACATTGG CAAGAGACTG
AGCTACTCCA GTGTCTCTTC TACGAACTCT AATGCTACTA CACCAAGCAT AATCGTTGCT
CACACTACAC CAACGCTCTT TGGAGGAAGC AGCACAGTCA CAACATCGTT GTCGCCTCAG
AATCAAGGCT TCCCATTCTA CGACAACCAG GATAGCTCCA AAGACTTTGA CAATTTCGTC
TTGACCTTTG ATGAGCTTCC ATCCACTGCA TTCAAGATTA ACCCTACAAT CCACGAGAGC
CCATAAGAGA ATCTACACTT TGAGTCTACA GATACCAACG AAACTAACGA TCGCCATTCA
ACAACCAGAA ATGTAGCAGA AACAGCCACC TCCAGACCAT GGACCTGGTT GGGAATGGAA
AATTAAACAG CCTCACAGCC AGCAATCGCA ATTCATCTGC AAGCAAATAA TTCGCGTACG
GCATCAGGTC TTGCTAATTA AAACTATCAT TGCCATTATT TTCGAACATT CTCTGCTCGT
CAGTTCGCGA GTGTTCATTC ACTTCTTGTA TTAAGCTTGA TTTTGCTTTG CCATCTTCAT
TAGAGTTAAT AATTTTCACG CCTGATTTTC TACGGAAGCA GTTCGAGGCC CTCTAATGTT
CATTTTGATG TGTGGTATAT AATTTAGATC GATTATTTAT TAGTAATTAA AATATCAGTT
AC
 
Protein sequence
MNPVSPPSPT DEAGHSTLGI SASGNVGYSS SHIKKKRVGK ACDSCRIKKT KCDGKKPCNR 
CIIDNKICVF TEKKKPKEKN HPQGYVELLE TRLDILTKSL EKLIELSRPS LPFLEEILQD
GKRTRRMKTE FESDSNDELS SDEDSQSPGT QTRVKKEKDF SIDELDHNST VVPDEDSIPI
NRVVSYLINS EGLLNNLPVE WEAGAMLAAN YVPKNMDKYS KVFAEHKLNV TEKNEIENHN
HNHTEFGPSP SSLAVHRDQL FQHSQFSNKR QNNQVAVKRE DDHPVLYEDG EDMAITSPTA
SALSQTSLTE QLNLNEFSLG GFSSGGLVVA GTGHFENANN TNSLSSYASS NNDFTMSDID
TDSVSSYSQG QLHHGKMPSH QISQIQNHQL QSQKFIKSAS ISPAEIENFP RRANSIFLSN
SQGCEGQPPS SVTKSGSISS LTSKYENHNL AMPVSSATPP PETLRRSSSS LIQRPCSPSH
QKAKNSGHVH KAQFHPHSSS NKSSTSGTVV SNNGNEFHIS GNYIGKRSSY SSVSSTNSNA
TTPSIIVAHT TPTLFGGSST VTTSLSPQNQ GFPFYDNQDS SKDFDNFVLT FDELPSTAFK
INPTIHESP