Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_66987 |
Symbol | NBP2 |
ID | 4837596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1548554 |
End bp | 1549822 |
Gene Length | 1269 bp |
Protein Length | 237 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388911 |
Product | protein that interacts with Nap1, which is involved in histone assembly |
Protein accession | XP_001383070 |
Protein GI | 126133090 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.315379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACATAGAAC ACATAACAGA CACGTTTTAC AAAACAGCCG GGATATATAT CTAACTTTGG TTATAAGCTT TGTTTCTGTA GCTGCCAGAT TCAATAATTG TTAGAGATTC TTGAATTACA ATTGTAGAAT CGTCAAATTG TTAACTTGCT GTCAATTTCA CTTTTGTCAT AAAATACAAA AGAACAGAAG ATATCATTGA ACAACAAGAA TTGTTCTATT CACTAACAGG ATAACAAGAG TCTGATCCAA TTCATTCTCA TCAATCTCAA TATACTTCAG TTTGAGGAAA GCCAGATCAT AAAGATTGCC TCCTAGATAC AGAGACTTAT ACACACAACA CACGAGTTTC ACTGAACACT TCATCAAACT ACTGAACTTT GATTCTATTG ACTTATTCTA GATTCGATCT TTCATCAAGT CCATCAAATT TTTCATCATC GTATTTATCG TTCGCTGAAC CATGGCTGAC GAAGATCACA AGAATATAAG TCTATACCTT CCCAACACCG TGATAAAGGA CTACGGGTAT CCCGAGAGCC ATCCGTTGCA TACTGGCAAT TTTGGAGCTA TGGGCGATCC TGAGGATGTT GACGATGAAG ACATCAACAG TGATGACGAC TATGGCTATC TCCTTTCTGC TGCCAACAAC AATACTACAC ATTACCATAG TCTCGTGCGG AGCATTGACG ACGAGGATGA CGACGAAGAG ATGAACAGCA AACTTAATGA CGATAACGAC TATATTTATA ATGGAGACGA CGATGGCGGT CGATCCAACG ATGAAATCAA CTGTAGAGCC AGAGCGTTGT TCGATTTCCA GCCAGAAAAC GATAATGAAG TGGCATTGAC AGAGGGACAG ATAATCTGGA TTTCGTATAG ACATGGACAG GGGTGGCTCG TAGCAGAAGA TCCAGAGTCG GGCGAAAACG GCTTGGTTCC GGAAGAGTAT GTAGAGATCT TCTACACCAA GGAAGAAGTA GCTGACGATG ATGTTCCCAA ACCGTTTCTA CCTGAGCTCT TGCAAAATTT GGAAGAAGAC GACAGTGACG ACGCCGACTG GGTAGACACA GACTACGACG AAGATGAAGA TGAAGATGAG CAATCGGAGG ATGAGCACAT AAACGAAGAG GCAGACATTT CAGACAGATT ACACGATGTC AAGTTGGTAT CGTGACGTCG TTGTTAATAT ACACTATTGT AATTAGAAAC AGTATATAAT AATAGTATTA ATAGTGAAGT GAACTATCAA ACACAGCATA TGCTATCTG
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Protein sequence | MADEDHKNIS LYLPNTVIKD YGYPESHPLH TGNFGAMGDP EDVDDEDINS DDDYGYLLSA ANNNTTHYHS LVRSIDDEDD DEEMNSKLND DNDYIYNGDD DGGRSNDEIN CRARALFDFQ PENDNEVALT EGQIIWISYR HGQGWLVAED PESGENGLVP EEYVEIFYTK EEVADDDVPK PFLPELLQNL EEDDSDDADW VDTDYDEDED EDEQSEDEHI NEEADISDRL HDVKLVS
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