| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66957 |
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| Symbol | HMO1 |
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| ID | 4837216 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1370484 |
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| End bp | 1371607 |
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| Gene Length | 1124 bp |
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| Protein Length | 232 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388531 |
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| Product | high mobility group-like protein |
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| Protein accession | XP_001383030 |
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| Protein GI | 150864277 |
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| COG category | [B] Chromatin structure and dynamics |
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| COG ID | [COG5648] Chromatin-associated proteins containing the HMG domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT CCTTCAAGAA CGCCAAGGAC CTGCTCGTAG CCTCATTATT CGAGTTGTCC
AAATCTGCCC AAGATGCCGC CAATGCTACC GTCAACTTCT ACAAGCTCGC CAGCGAAGAG
GGTGACGCCG AAACCCTCAA GCTGTTGAGT GAGACCTGGA AATCTGTCGC GTTCGCTACC
GATCCCACCA ATTCCAACGG AAACGGTTCT AAGGTCAATG GCTCTAAAGT CGACGACGAT
CTCATCGCTA CTGCTGCCGC TGCTGCTGCC GCAGTTTCCT CGGTAGAGAT CCCCACCGTT
CCCTCAGTCG GAAAGGCTAA GGTCACCAAG GCTGAAAAGC CCAGAAAGAA GAAGGTGGAA
AAAGACCCCA ATGCTCCAAA GAAGCCTTTG ACTATCTACT TTGCCTTTTC CTTCCATACA
AGAAAACTGA TCAAGGATGA CAGAGAAAGA AAAGGCTTGC CAGCTTTGTC TGCTATCGAC
ATGAACGAAA TTGTCAAGCA GAAATGGGAA TCCATTACTC CAGAAGAAAA GGAAATCTGG
CAAAAGAAGT ACGCCAATGA GTTGAATGAA TACCAAAAGG AAAAGGAAAA ATACAGACTC
TCCAAAGAAG ACAAACCAAA TCAAGTAGCA GCTGTTGCAG CAGAAGTTGC CCGTGCTTTT
GAACCTACAG TGGACATTCC TCTCTTGTCT CTGGTGGATG CTCCTAAGAA GAAGGAGAAG
AAGAGAAAGT CTGAAAAATC TGACAAGAAG ATCGAAAAGA AGTCGAAGAA GGATAAGATT
GTCCAGCCTA TCCAATTGCA GCATTAAAGA AGACGTCGAT CATGATTATG ACATGAATTG
TTTTAAGAAT TCTCCTGTAA TTGCTATCTT AAAATCGCCA TCCAAAATGA TATAATTGTA
TGAAAATATA ATTATATCAT TGTATCAATT ATTATCATGA ATCGGTCTTG AAAAAGATTA
TTATTCATAT AGAAGATTTG ATAATGATCT TCATGATTAT CTTTCTATTT ATTGCTAATA
GCATTTACCG AATGCAACCT TCACTTCTGC CTCGATGGTC CAGCTAGATA TATAGTGTAT
TATTACCCAC TCTCCTCTAA ATGTACAACT GTTTCTATCA GTTT
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| Protein sequence | MSESFKNAKD SLVASLFELS KSAQDAANAT VNFYKLASEE VDDDLIATAA AAAAAVSSVE
IPTVPSVGKA KVTKAEKPRK KKVEKDPNAP KKPLTIYFAF SFHTRKSIKD DRERKGLPAL
SAIDMNEIVK QKWESITPEE KEIWQKKYAN ELNEYQKEKE KYRLSKEDKP NQVAAVAAEV
ARAFEPTVDI PLLSSVDAPK KKEKKRKSEK SDKKIEKKSK KDKIVQPIQL QH
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