| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66925 |
|---|
| Symbol | |
|---|
| ID | 4837455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 1127457 |
|---|
| End bp | 1131342 |
|---|
| Gene Length | 3886 bp |
|---|
| Protein Length | 1062 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640388770 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382996 |
|---|
| Protein GI | 150864254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCAGTTTCTT TTCCTCAGAA CGACTGGTAT TGTCACCGTA GCTACACAGT TCTCGCTACA
TATCGCCGGT AGTCTGAAAC GTGACTTCGT CTTGTACCCT GGTCCTCGCT GTCGAAGTCC
GTATAGGCAC ATAAAGTCAT CGTACCCTGC TCCACCTCGC TAATTTTTTT CGGAAGCTTT
CCTTGTGCTT CTCCAACAGA ACATCCCTAG ACTCGTCTGT TCTTTGAAGC GTAGACATAC
TGTAGTGTTT GGCATCCATA ATATCCGTAA TATCCGTCCG TCCACAGTGC CTGCACTATT
GCTGAATCTT GAGCCGTCTC CACTAACTTC GGCAAAGTCA TCCAGAAAAG CTACACCATC
CGCAGCACAG TATTCACTTC TACAATAGTA ATATCAGCAT ATCCTTGCGA TTCCTCTGCT
TGCTTTCCCA ATCCGACCAC ATCTAAATTC ATAACCTAAT CCCACTGTAC TTCACCTAAT
GCCAATCCCG TCAATATGAT GTTCCAAAAC GACTCCAAGT TCCCCAACGT TCCAACCACG
GGGAACAAAC ACACGCTCGA CACCATGAGC CCCTTCGTCC ATAGTCACGG CTTCGACAAC
TCCAGCCAAG CCAACAACCA TCCATTCAAC CCCAGCCTCC ACAACATCAC AGCCAACATA
TCGCGTGGCA GCTATAGCCC GGAGCCTCCT TCCAGCTCAG GTCTCGATTC TTCTGTGCCC
AACTTGTTTT CTGCGTCGTC AAACACGTCG GGGTCGTCCG TTTCGAAGCC CGGTGTCGTC
ACTAACAAGC ACGTGAACCC CAACGCTGTA CCTTCTACTA ATAAAAAGCG TAAGTCTAAC
GTGAGGGCCT GCGATGCCTG TGCCATCCGT AAAGTCAAGT GTGAGGCGCA GAGACCATGT
AGCCACTGTG TTTCCAACAA CTTGAACTGC ACTCAGCTAC GTGAAAGAAA GAAGTCCGGG
CCAAAGAACT TACACAGAAA GACTTTGGAC TCCATCAACA GTTTGAGCGA GGTCATCGAG
CTGAATACCG GAAAACCGAC AACGAAAAGA CCGTCGCTTC TGGCACAATC CAGTAGCAAC
AACATCACGC CCATCAAAGA GTCTTCCAAC GAACTTGAAG ACGATCAACT CTCTTCTGCC
TCTAATGCCC CTGTTCATGC CATAAGCGGC GCAATACCCA GTAGTATTCC CATGGGAGCG
ACGGAAAGCG CGAATGCGAC GGCTGAATAC AAAGTAACAC CGTATAACTT GATTGAGAAC
ATTGCAATGA TTGGTGATGA ACCTATAGTA TTCGAGTTGG TAAAACCTCT TACTGTCCAG
TCGTTGGCGA TAAACTACAT GAAGTTGATA GAGTTCGTAG CCACTAACTA TCCAAACCTT
CAGCATCTTC CGAACAATCC TTTCCATTCT GAGCTTAATC TCATGGAACA CCACGAGGAT
TCCGTCTTTC TTTCGAAATT ATTGGTAGTA TTGACGGTGA ACTTGATCAC GAGCGAGATC
TTGATCAAGT TGAAGAAGCA GAAGTTCAGA AACTTCATTA AGTACCCGAA GAAGAACTTG
TTGTTCAAGA ATTTCAAAAA CTATAGGAAC TTGCTTCATT TCAAATGTAT TGAAATCTTC
ATCTTGATTG AAAAGAACTC GATAGTGCCA TCTATAACTC CCCAGACCGG CACTAAAGCC
GGCAACTACC AGAGCCTCTA CCCTTTGAAC CAGTACCAGG TCTACTACAA CTTGTCTTTG
AGTTGTTTGC ACTTGTGTAA CTATTATCAT ATGTTGAACT TGACGAACAC GCTAAACACA
GCCAATTCAA GCGATAACAA TTATGGCAAT GAAGCTCAGG AGCACCAGAA ACTCATCAAC
TTGAGGAAAA GTATCGCCTA TTTCCAACTT ATTAATATCA AAGCCAGCGA CAGCGCGGTT
GTCGTACAGC TCTATGAGTT ATTTGAGATC TTATACACCT TTGAAAGATA CTACATGGTG
TATTCGTCCA ACAATTACAA TCTCAACTTG GTGAGAAACA ACGACGTTGT GATCCAGTTG
GACTCAAAGC GTTTCATGAA GTATCATAAC GAAAATATCA ACAACTCATT CAACCTGAAC
TTTTTGTTTG AGATGATCAG TAGTGTGTCT GAGAGCAACG AAATGGATTC TGCGACAATC
AGCAAAATTG TAAAGTTTTC TAACTTTAAC ATTCGGCTCA AGGACGGCAA TACGATGTTA
TCTAAGTATA GCTCTTTTTC TACAAAGATC AGAGCCTTGA GGAGCAGCGA CGAGATTCTT
GAGGTGATCA AGAATGTTTT TCTTTTCAAG TTGTTGATAA CCTTCCCGTT AGATATGGAA
GATTCACGCG TGGAATTGAA GCAGATCACA GCTGATTTGA ACTACTCTTT GACAAGATCT
AATTCTGATT TGTTCAAGCT TCAAGTTTCC AACTACCAAT TGTTACCTCA TCTCTTGCAT
TTGCTCAAAG TGTTGCTACA AGTGAAGGAA GAAGAGGTTC TGAACCGGAT GGAGGATCAA
ATTACACAGG CCACTAAAAT CGAAGATGCT CAGGAGCAGC AGGTTTATGT AGAGTTCAGT
GACAATTTGA TCAAACATTT CCCGTTCTTC AACAACATTA ACAAGTTGAT TCGATCTGAG
AAGCTCTTGA ACTCGTGGTA TTTGAATCTC ACCGAGAACA GAACCAAGTT GAACGAGTTT
AAGAAGATGT ACGACCACAA ACAGACGCTC GAGAGAGAAC TCATCAAGTC TCAAGGAAAT
ATTGACGTTT CTATCAATCA ACTTTTGGAA GAATTAGATG CGACAAAGTT GATGATCCAC
TCTAGCACCT CCTCGATTCC TAACTCAAAT ATGGTTACGA CGTATCCTCT GCCGGAGAAC
CATAACGTAA AGCCGTCTTC ATCAGGCTTC AATGCTGAAG ATCAAGACGA AGAAGATGAA
GAAGACGATT TCTTTTCTAT AAATCCAACT TCGCGTGTAC AGAGAACCAC TCCTCCTCTC
AACCAGGCCA AGTTTGTCTC GATGACAAGT CGTGCGTCGT CTTCTACTTC TACTTCTTCT
TCTGTTTCTG CTACTGATGC TACCTCGATG AGCCAGAATA CTGATCATGT GATCATACCG
CAGCCAATGG CACCTACTCC TAGTGCAATG CATCCTGCCA AACACGACGA AACTCCCGGT
GCTATGACCA TGAGTGCTAG TAGTTACAGT CTATTTAACG ACTTCTACGG CGCAGGCACT
TCAGGCTCGC TAACTAATTT GTTTCAGTTC AACAACACCT TTCTAGGCAG TGGTGGAAGT
CCACTCCCAC CTCCACAAAA TCTCCAACAA CAACAGCAAC AGCAACATAA TCATCTACAA
CAGCTTCAGC ATCCGCCGCA GCCGCTACCG CCTCCGCCGC CTACTGTCTA CGGTAGCAAT
CTTGTAGCAC CTTCTATCCG AGAGGAAGAG GTCAAGTTGA CTCCAGGTCA GTTTATGTTT
TGAACGAATT ATACGAATGT TTTATTACTC TAATCACGAC TTTTAAAAAG TTTTTGTCAC
TTCATATAGA AATGTAATAG ATACCAGTAT TTGATGTAGT TGCAAATTTG GAACACTTGT
TGCCTATTCG GGACGTATCA CGTGAATTGA AAGATGGAGA ATATGACAAA AGCAAGGCGA
AAGGGCCGGC TAGGATAGAT GAAAAGGTAC ATTGGAGTGA CCATACTGGG GAGGCGAGGA
ACTTGATTGA GACGCGAGAG TGTTGGAGAG TAGTCTACTA TAGATATGAA AATAGAAGCC
CAGATATGGA AGTAGTAGAG CTCTTAACTG TAGCGGAGAG GAGAAGAAGA AGAAGAAGAA
GAAGAAGAAG AAGAAGAGCG AAAGATACAG AACGCCAGCC CATTGA
|
|---|
| Protein sequence | MMFQNDSKFP NVPTTGNKHT LDTMSPFVHS HGFDNSSQAN NHPFNPSLHN ITANISRGSY
SPEPPSSSGL DSSVPNLFSA SSNTSGSSVS KPGVVTNKHV NPNAVPSTNK KRKSNVRACD
ACAIRKVKCE AQRPCSHCVS NNLNCTQLRE RKKSGPKNLH RKTLDSINSL SEVIESNTGK
PTTKRPSLSA QSSSNNITPI KESSNELEDD QLSSASNAPV HAISGAIPSS IPMGATESAN
ATAEYKVTPY NLIENIAMIG DEPIVFELVK PLTVQSLAIN YMKLIEFVAT NYPNLQHLPN
NPFHSELNLM EHHEDSVFLS KLLVVLTVNL ITSEILIKLK KQKFRNFIKY PKKNLLFKNF
KNYRNLLHFK CIEIFILIEK NSIVPSITPQ TGTKAGNYQS LYPLNQYQVY YNLSLSCLHL
CNYYHMLNLT NTLNTANSSD NNYGNEAQEH QKLINLRKSI AYFQLINIKA SDSAVVVQLY
ELFEILYTFE RYYMVYSSNN YNLNLVRNND VVIQLDSKRF MKYHNENINN SFNSNFLFEM
ISSVSESNEM DSATISKIVK FSNFNIRLKD GNTMLSKYSS FSTKIRALRS SDEILEVIKN
VFLFKLLITF PLDMEDSRVE LKQITADLNY SLTRSNSDLF KLQVSNYQLL PHLLHLLKVL
LQVKEEEVSN RMEDQITQAT KIEDAQEQQV YVEFSDNLIK HFPFFNNINK LIRSEKLLNS
WYLNLTENRT KLNEFKKMYD HKQTLERELI KSQGNIDVSI NQLLEELDAT KLMIHSSTSS
IPNSNMVTTY PSPENHNVKP SSSGFNAEDQ DEEDEEDDFF SINPTSRVQR TTPPLNQAKF
VSMTSRASSS TSTSSSVSAT DATSMSQNTD HVIIPQPMAP TPSAMHPAKH DETPGAMTMS
ASSYSLFNDF YGAGTSGSLT NLFQFNNTFL GSGGSPLPPP QNLQQQQQQQ HNHLQQLQHP
PQPLPPPPPT VYGSNLVAPS IREEEVKLTP VANLEHLLPI RDVSRELKDG EYDKSKAKGP
ARIDEKKPRY GSSRALNCSG EEKKKKKKKK KKKSERYRTP AH
|
|---|
| |