Gene PICST_66879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66879 
Symbol 
ID4836896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp821358 
End bp822621 
Gene Length1264 bp 
Protein Length317 aa 
Translation table12 
GC content41% 
IMG OID640388211 
Productpredicted protein 
Protein accessionXP_001382393 
Protein GI150863796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.642668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTA TAGTAGCACA CGGCGCTCGT ATAAACAGGC AGCTAGGCGG TTGCAAGAAT 
GTCGCAAGTC TCGGGATATC TCTCCGATAC TACGCTACCA GATCCGAGCA TGATTCTCCA
TTTGATCATT TTCCCATTAG AAGGAAACCG TGGATCTCCT GGAAAACAAC TGCAGTTTTC
TTTATTGTAG GGTCGTATTT CGCCTACAAT GAGACGTTGT TCAATACATA CGAGAAATTC
ACAAGTCTTG ATGAAAACGA CAGACAATCG AGCGACATTT TACCAATGCA GTTGGAGTAC
AAGTTGAAGA ACTTACCGAT CTATCAGCAA TTGGCACACC CAAAAAACTC AAACAAATGG
TACAAATTAC AGTCGTGGGA AAATTTAGAC CACAATGTGT TGGACAACCA GACACCGGAC
TTCAGCGAGG AAGATAGGCG AGACCAGGCT GTGAAGAGCC AATCAGAGTA CGCAGAGCCT
TCGTTGACAA CTCTGACGTT AGCCAAACCT GGAGGAATTC TTATTAAACC TGTAATATTT
CACAATGTTG AGACAAACGA AGGTGTTACA ATTGTCCATG CTGGGTTCAG ATTGTGCGGA
TATCCCTTTA TTATACACGG AGGTATCATC GCGACAGTTC TAAACGAGAC ATTCAAGAGA
AATGCATCTT TGACACTGGA AACAAGCTCC AATTTGAAGG ACGATTTTAA GGTAGAGAAT
CTCACCATAA ACTACAAATT CCCTACGTTT GCTAACCAAT TCTTGATCGT CAAGACGAGA
AAGAAGGAAG GTGTAGATAC GAACGACAGG AAGACTATCA CTCTCGAAAG TGTGATACAA
GATAAAAAGG GACGGACTTT AGTCAAAAGC GAGGCTCTTT TGCACGATAC CGGAAGAGCT
ACCAATAGGA TCAAGGAGCA GGAGAAGCAA AAGAGCTGGA ACCCTTTCAA GTGATCTCTT
GTAATTGTTG AAGCATCCAC TTGCAGAGTT ATGATGGCAA GACAAATGAG GCTGTAATAC
TAATGCAATT GAACTTGCGG AAATAGGTTG ATCTACCAAG GTACCCCAGC TTCATTACAA
AGATACTGTT GCACTTTACT AAATTGTCTA TGCACATTGT TCAAAGTTCG AGACTTGAAA
GATCCATGGA CACAAGCACG GCCATATTAG CAAGTACAAG AGATTAATGT GATACTACAG
CCTTAACATG CGCTATTAGC TATATTTTGA ATTATTAGTC TTTGGCAATA AACTTCTTTA
AATT
 
Protein sequence
MSRIVAHGAR INRQLGGCKN VASLGISLRY YATRSEHDSP FDHFPIRRKP WISWKTTAVF 
FIVGSYFAYN ETLFNTYEKF TSLDENDRQS SDILPMQLEY KLKNLPIYQQ LAHPKNSNKW
YKLQSWENLD HNVLDNQTPD FSEEDRRDQA VKSQSEYAEP SLTTSTLAKP GGILIKPVIF
HNVETNEGVT IVHAGFRLCG YPFIIHGGII ATVLNETFKR NASLTSETSS NLKDDFKVEN
LTINYKFPTF ANQFLIVKTR KKEGVDTNDR KTITLESVIQ DKKGRTLVKS EALLHDTGRA
TNRIKEQEKQ KSWNPFK