Gene PICST_65252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65252 
SymbolFST11 
ID4837326 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1737791 
End bp1740167 
Gene Length2377 bp 
Protein Length674 aa 
Translation table12 
GC content45% 
IMG OID640388641 
Productputative transcriptional regulatory protein 
Protein accessionXP_001383101 
Protein GI150864329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.361708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG TGGTCAAAGA GTCCACACCC AAACGAGTCC GTGCCAACTT GGCTTGCGAC 
CGGTGCCGCC AGAGAAAGAC CCGCTGTGAT GGAATCCAAC CGGTTTGCGG AACATGTATG
AAGCGCAACA TTCCATGCAA GTTTGAGCGG AAGTACCCTC GAGCTCAGGT ATCCGTCCAG
TACGTCAAGA CACTCGAAGA GAAGTTGGGC ATCCTCGGGC CCCAAGCTGA AGGTAACGCA
AAAGTTGCCA ACAAATGCTC GTCAGAAGAG CCTCCAACTG AAGGTAGTCT CAGAATTGAC
CCCTCACCCA CTAGTGACAT ACTTCATAGC CAAAATCTGA ATCAGCAAAA CCTCCAACAA
AACCATCAAC AACTTCCAAT CCAAGAGCTT CTGCTTCCTA ACCAGCAATT ACATGCTCCA
ATGAATAGCC GTATAACGCC CCAGCCTCCT CGCAATCTGG AGTTTACTGC CATGTCCGTG
AGCTCCCTGA ATGATAGCCA TGCTCCTTCA TACGCCTACC CCAACTCCAA CGACAAGAAG
TCGTTGATGT TGAACAACGA CGATAAGCAC TCTGTAGATT ATACTGTAAA TGGACTGGCC
ACTTCGGCTG CTTATAAAGA TGACGATTCC AGTGCCGATG CCATGGGAGC AGGCTCACTT
TCAGGGAACA GGAACAAAGA CAAGAACTTC TACGGATCTT CAGCTGCAGT TTCATTCATG
AAAGAACTAG CCACCGCAGT TGATGGAGGT TTTCAGAGAT ACTCGGACTC GGAAGATACA
GATATGACGG AACGAGTCAA GTACAAGATG TCTCGTAACG ATGCCAGAAG CACCCGAGGG
TTGTCAGACA TGTTGGTGCC TCCACGAAGC ATTGCTGATC GCTACGTGAG AAACTACTTC
GAATTCACGT ACAATCTCTA CCCTTTTGTA CACGAACCAA CATTTATGGC TGCCTATGAT
GAGATCTGGT CTGCTGACGC AGGATCCTAT GAAGTGGATG AGCTTTTCTA CTCTATTCTA
AATATCATAT TTGCATTTGG ATCCCGCCTC CTGCTAGACA ACGACCGTCA GGAGAGCTTC
GCTAATGCTG ACATGTACTT TGAGCGGTCC CAGGAGTTGC TCCGGTTTCA TCTTATGGAT
GCCGGTTCAC TCTTGTTGGT TCAAGCGTTA CTTCTTACGG GTCAGTATTT ACAAGCTACA
ACCAGGCTGG CTGGGTGCTG GAATATCATA GGATTGGCGA TCCGTATAGC TCAGGGCTTG
GGGTTACACG AAGAACAGAA TCTTGACTCG ACAGATAACT ATATAGAAAA GGAGATGAGG
AAGAGGTTGT GGCATGGATG TCTAATGATG GATAGAATAG TATCTATGAC ATTGGGAAGA
CCTATGATGG TAATGCATGA CTCTCGTATG CCTTTACCTT CTGCAGTTGA TGATGAGAAT
ATCTCGGACG ATTCGTACTT GCCGTCTACT CGCCCGTCAT ACATGTGCTT CTTTAATGAA
ACAGTTAAGC TCTACGATAT TCTTGCTGAT ATTTTGAAGA TATTCTATTC TAGCAGCGAG
CCAGAATTTG TTGATCTCTT TCTCAGCATA TTTCAGATCG AAGAAAGACT CAACAAATTT
CATGATAGTG TACCTACACA CATCAAATTC GGATTTGAGT TGCACGAAAA ACCTTTCCGT
CGCCAGAGTA TCGTTCTTCA CTTGCGGTAT TTGCATTTGA AGATGGTTCT CTATCGCCGT
GTATTATTTC CTAAAAAAAA TTCAACAAAC AAAGGAGAGA TTCACTCCGA ATTGTACTCC
AATACCACAA AGTCGATATC TTTGCTTTGT GTGGAAGCGG CAATCGAATT AATTCAGGTG
GTCAAAAAAT ATAGGGCCGA AGACATACTG CTTTTGCCCG CTAGTTGGTA TAATGTGTTC
TACTTGTACA GTGCCGAGAC AGTAATGTTG GCGGCTAAGC TTAAGCCTAC CCTACAAAAA
GAAACTAGCA CGGATATGTT CACCACTGCC TGGGCCAACG GATTAGAAAT GTTGGCCAGT
TACCAAGGCG AATCAGAGTC GGCAGTGCGG TGCTTGAAGA TATTGGAAAT TATGGGGGAA
AGAGTTCAGA CATCTGGGTT CCAACAAAAA CGGCATATTG ATATTCCTAC AGTGGACAGC
AGTTCAGCCC AAAGTAGTCC TTTGCATGTT CCTTCCGATG TTCTCTATTC ATTATTATAT
GATACTGCGG GTCCATTTGG AGGACCATTC TTCTACCGAG AAGATATGAA TCGGTTTTCA
AGCTAGAATA GAATTTTATC AGCCGGGAGT ATTTGAACTC CGTTTGCTTA GTTAGTTTTC
CTAGTTAGAG GGGATTAATA AAATAACCGA GTGAATT
 
Protein sequence
MTTVVKESTP KRVRANLACD RCRQRKTRCD GIQPVCGTCM KRNIPCKFER KYPRAQVSVQ 
YVKTLEEKLG ILGPQAEGNA KVANKCSSEE PPTEGSLRID PSPTTMLLHT PTPTPTTRSH
DDSSADAMGA GSLSGNRNKD KNFYGSSAAV SFMKELATAV DGGFQRYSDS EDTDMTERVK
YKMSRNDARS TRGLSDMLVP PRSIADRYVR NYFEFTYNLY PFVHEPTFMA AYDEIWSADA
GSYEVDELFY SILNIIFAFG SRLSLDNDRQ ESFANADMYF ERSQELLRFH LMDAGSLLLV
QALLLTGQYL QATTRSAGCW NIIGLAIRIA QGLGLHEEQN LDSTDNYIEK EMRKRLWHGC
LMMDRIVSMT LGRPMMVMHD SRMPLPSAVD DENISDDSYL PSTRPSYMCF FNETVKLYDI
LADILKIFYS SSEPEFVDLF LSIFQIEERL NKFHDSVPTH IKFGFELHEK PFRRQSIVLH
LRYLHLKMVL YRRVLFPKKN STNKGEIHSE LYSNTTKSIS LLCVEAAIEL IQVVKKYRAE
DISLLPASWY NVFYLYSAET VMLAAKLKPT LQKETSTDMF TTAWANGLEM LASYQGESES
AVRCLKILEI MGERVQTSGF QQKRHIDIPT VDSSSAQSSP LHVPSDVLYS LLYDTAGPFG
GPFFYREDMN RFSS