Gene PICST_65185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65185 
SymbolKTR1 
ID4837261 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1071310 
End bp1072595 
Gene Length1286 bp 
Protein Length393 aa 
Translation table12 
GC content47% 
IMG OID640388576 
Productalpha-1,2-mannosyltransferase 
Protein accessionXP_001382430 
Protein GI126131810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5020] Mannosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTTTTCACC TTTTACTTTC CCAGTTTTTG ATAGCGCTTT CTGAGACTCC ATCTGCAGCA 
TGGCCTCGTC CAGATCAAAC GCCCGTATCA TTCGGTTTGC CATCTTCGCG CTCGTGTTGA
TCGGCTGCGG CTACATCCTC ACCAGAGGCT CCGCTTACAA CTTCACACCA CCATCTCCCG
GCAACAAGGA TGCAACTCCT GTAGCCTCGG AGTCCCCCGC CGAACAGCAG GGTAAGGTGG
GCCCCACACC CAAGCACTTT GACTCCAAGA CTCCAGCAAA GGGAGACCAA TTGGTATTCA
ACAAAAACGA AAAGATCAAG GCTACCTTTG TTACCTTGGC CAGAAACTCT GATTTGTTTT
CCCTTATGGA CTCCATCAGA TCAGTCGAAG ACAGATTCAA CAATAAGTAC AACTACGACT
GGGTCTTCTT GAACGACCAG CCCTTTGACG AAACCTTTAT TGAAACCACC ACTGCCGCCT
GTTCTGGTAA GACCAAGTAC GGTTTGATCC CTAAGGAGCA GTGGTCGTAC CCTCCTTGGA
TTGACCAGGA AAAGGCTGCC CTTGCCAGAG AAAAGATGAG AGAAAAGAAG ATCATCTACG
GTGGCTCTGA GCCATACAGA CACATGTGTC GTTACGAATC CGGTTTCTTC TGGAGAGCTG
ACGAGTTGAA GGAATACGAA TACTACTGGA GAGTTGAGCC TGATGTCAAG ATTTACTGTG
ATATCAACTA CGACATTTTC AAGTGGATGA AAGACAACGG AAAGGACTAC TCCTTTACCA
TCTCGTTGCC AGAGTACAAG GAAACCATCC CAACTTTGTG GGAAACAACC AGAAAGTACA
TTGATGCCAA CCCTCAATTC TTGGCCAAGG ACAACTTGAT GGAATGGATT TCTGACGATC
AGGGTAAAAC CTACAATGGA TGTCATTTCT GGTCCAACTT TGAAATCGGT AACTTAAACT
TCTACAGAGG CGATGCCTAC CGTCAGTACT TCGAGCATTT GGACAAAGCT GGTGGGTTCT
TCTACGAAAG ATGGGGTGAT GCTCCTGTGC ACTCCATCGC TGCTGCTTTG TTCTTGCCCA
GAGACAAGAT CCACTTCTTT GAAGATGTAG GCTACTACCA TGTTCCTTTC CATAACTGTC
CTGTAGACAA GGAAGTTAGA TTTGCCAGAA ACTGTAACTG TGATCCAAAC AAGGATTTCA
CCTGGAGAGG TTATTCGTGC ACCACCAAGT ACTACACTGT CAACAACTTG AAGAGACCCA
AGGGTTGGGA AAAGTACACC CAATAA
 
Protein sequence
MASSRSNARI IRFAIFALVL IGCGYILTRG SAYNFTPPSP GNKDATPVAS ESPAEQQAKG 
DQLVFNKNEK IKATFVTLAR NSDLFSLMDS IRSVEDRFNN KYNYDWVFLN DQPFDETFIE
TTTAACSGKT KYGLIPKEQW SYPPWIDQEK AALAREKMRE KKIIYGGSEP YRHMCRYESG
FFWRADELKE YEYYWRVEPD VKIYCDINYD IFKWMKDNGK DYSFTISLPE YKETIPTLWE
TTRKYIDANP QFLAKDNLME WISDDQGKTY NGCHFWSNFE IGNLNFYRGD AYRQYFEHLD
KAGGFFYERW GDAPVHSIAA ALFLPRDKIH FFEDVGYYHV PFHNCPVDKE VRFARNCNCD
PNKDFTWRGY SCTTKYYTVN NLKRPKGWEK YTQ