Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56448 |
Symbol | OPI3 |
ID | 4836886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2148043 |
End bp | 2148690 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640388201 |
Product | Second and third steps of methylation pathway for phosphatidylcholine biosynthesis |
Protein accession | XP_001383176 |
Protein GI | 126133302 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000744789 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.048662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAG TCAAGGAGTT GTCCACTTTG CCAGCTGATC TTACCCATCT TGCCACCAAT TTTGGCAGCT ACGTCGACTT GAATTGCCAG CTCAAGTTTG CCGTGGCCAC AATCGCGTTT AACCCGATTT TCTGGAACAT TGTTGCCCGT TTTGAATACA ACACTCACTT CCTCACCAAA ATCGCAGGCT CAGCCAAAAC TGGTTGCTAC CTTTTGGCTA TCACCATTTT CTCGTTGGGA ATCTACAGAG ACCACGTCTA CCATGATGCC CTTTTGCAGC AACCTACTTT CCAGCCATTG GTCGATTCAG TTTTGGTCAA GGCTGCTGCT GTAGCTACAT TTGGTCTTGG TAACATCTTT GTTCTTACTT CCATGTATGC CTTGGGGGTC ACAGGAACTT ACTTGGGAGA CTACTTTGGT ATCTTGATGA ATGAAAGAGT AACTGGTTTC CCTTTCAACG TGAACGACAA TCCCATGTAT AACGGGTCCA CTCTCTGTTT CTTAGGTACT GCCTTGTGGT ACGGTAAGCC AGCTGGTATT GCTGTCGCTG GCTTCGTTTT CGTCATGTAC AAAATCGCTC TTTTGTTTGA AGAGCCATTC ACTGCCAAGA TCTACGCTGC TAGAGATGAA CAAAAGAAGA ACAACTAA
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Protein sequence | MSIVKELSTL PADLTHLATN FGSYVDLNCQ LKFAVATIAF NPIFWNIVAR FEYNTHFLTK IAGSAKTGCY LLAITIFSLG IYRDHVYHDA LLQQPTFQPL VDSVLVKAAA VATFGLGNIF VLTSMYALGV TGTYLGDYFG ILMNERVTGF PFNVNDNPMY NGSTLCFLGT ALWYGKPAGI AVAGFVFVMY KIALLFEEPF TAKIYAARDE QKKNN
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