Gene PICST_56381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56381 
Symbol 
ID4837071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp719636 
End bp719926 
Gene Length291 bp 
Protein Length96 aa 
Translation table12 
GC content45% 
IMG OID640388386 
Productpredicted protein 
Protein accessionXP_001382378 
Protein GI126131706 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5227] Ubiquitin-like protein (sentrin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.311843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATA CCGAGCAGAA CAACACCCCC AAAGAGGAAA AGACCGACAA CACCCACATC 
AACCTTAAGG TTTCTGATGG ATCTGCTGAG ATCTTCTTCA AGATCAAGAG ATCGACTCCT
ATGAAGAGAT TGATGGAAGC CTTTTGCAAG AGACAAGGCA AAGACTTAAG TTCGTTGAGA
TTCTTGATTG ACGGAACCAG AATATACCCC AACAACACTC CAGACGAGTT AGAGTTGGAA
GATGGAGACA CTATAGAAGC CCATCGTGAA CAGACAGGGG GTTCGTATTA G
 
Protein sequence
MSDTEQNNTP KEEKTDNTHI NLKVSDGSAE IFFKIKRSTP MKRLMEAFCK RQGKDLSSLR 
FLIDGTRIYP NNTPDELELE DGDTIEAHRE QTGGSY