Gene PICST_56298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56298 
Symbol 
ID4837429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp27442 
End bp27921 
Gene Length480 bp 
Protein Length159 aa 
Translation table12 
GC content43% 
IMG OID640388744 
Productpredicted protein 
Protein accessionXP_001382231 
Protein GI150863678 
COG category[S] Function unknown 
COG ID[COG0401] Uncharacterized homolog of Blt101 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.727803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACG AAAACATTCT CAACGACAGT CCGGGCAAGG TCATCTTGCT AGTGGCCGCG 
TTTGTTCTTC CACCATTGCC TATTTTCCTT TTGCAAGATT ATAACATCTT CACTAGAGAG
TTCTTGGTGG CAGTTATTTT GACGGTATTG GGTCACATTC CTGGAACAAT ATTTGCTGTA
TTCTATATTC TCGTAGAGTA CCCTAAAGTT TATGGCAGAA GACAGGCTGC TGCAGGCTAT
CTGAGTGTTC CTGGAGACGT AGAAAACCAG ATCGAAAATG AAGAACAAAC TCCTTCTGGC
GAGAGAGAAC CTTTCAGAGA TCAACACGAT CAAGAAGAGC ATCAACAGTT CACTGACACT
GACAATGCTG CTAACGAAAC GAATCCTCCT AGTTATGAAG CTGTAGCTGG TAGTTCAACT
GGTGAAGCTC ATACAGTTTC TGATATCAAA CTGAACGGCG ACAACAAGGT CCAACAATAG
 
Protein sequence
MPNENILNDS PGKVILLVAA FVLPPLPIFL LQDYNIFTRE FLVAVILTVL GHIPGTIFAV 
FYILVEYPKV YGRRQAAAGY SSVPGDVENQ IENEEQTPSG EREPFRDQHD QEEHQQFTDT
DNAANETNPP SYEAVAGSST GEAHTVSDIK SNGDNKVQQ