| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56161 |
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| Symbol | |
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| ID | 4836762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 45612 |
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| End bp | 47048 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388077 |
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| Product | predicted protein |
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| Protein accession | XP_001382235 |
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| Protein GI | 150863681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAACCAACCA TATATGCACT TTCCACTAAA TTAGGCAGAG CAGCCATTGG GGTTATCAGG
GTCTCCGGTC CGGAATCGAA ATATGTATTC AACAAGTTGA CAAATACAAA AACTCAACCA
AAGCATAGGG TAGCCAGCGT TCGTAAGCTC TATTCTCCTA AATCGGGAAT CTTGTTGGAC
GAAGCATTAA CATTATTCTT CAATTCTCCC AACACGTATA CTGGGGAAGA CTTGCTCGAG
CTTCATTTGC ATGGTGGAAC TGCAATCATA AAGTCAGTTC TAGCAGCTAT TAAGGAACTA
CACGATCCCA AGAAAGGAAT AAATATCAGA TACGCTGAGA ATGGTGAGTT TTCCCTGAGA
GCGTTCGTCA ACGGGCGCTT CGATCTAACA GAAATAGAAG GAATACGAGA CATGATAGAC
GCCGAAACGG AAACCCAAAG AATAGCATCG TTATCTTCTT TAACAGGAAA CACCAAAGAA
CTATTTCTGC AATGGAGAGT AGGGATTTTG AATAATATCG CATTGATGAC TACGTTGATC
GACTTTGGTG AAGACCACGA TCTCGAAGAA ACAGCTCAAT TATTCGACAA CGTGGAAGAA
AACATCAAGA AACTAGAACA GGAGATACAC AAGTATTTGC AGAAAGTCAG ATCGTCAGAG
ACTTTGCTTC GAGGAATACG AATGGTTCTC TTGGGCCCTC CAAATGCAGG GAAATCATCA
TTGCTTAACT TACTAGCAAA CGAGGATGCT GCCATTGTCA GTGATATTGC GGGTACAACT
AGAGATATCA TTGATGTCCC ACTTGATATT AACGGTTACA AGGTTGTCAT TGGAGATACT
GCTGGTATCA GAGATACAGA ATCGGCAGAC AAGATCGAGA TAGAAGGCAT GAAAAGAGCG
ATTGCCAAAT CTTACAATTG CGACCTTATC TTAGCGGTTC TTCCATTTGA AACTGACAAC
AAGTCAGATC TCCATCAGCT CATCAGCCAC TTACTGTCAT TACGAGAATT GAATAGACCA
GTTTTAGTAG TATTGAATAA AGAGGATCTC ATTAAAAATC TCGGAGAAAA ACAGGAATTG
CTTAAATATT TCTCAGAGAA ACTACAGATC AGCCCGGAAT ACTTTCATGT CGTGTCTTGT
TTGACAGGAG GTGGGATTAA TTCCTTAAAG AGCGCTCTCA GTCACACTTT CAGAGCAATT
ACTTCTTCAG AAACTACTGA TCCTATTATA ATATCGTCTC GTGCACAAGA TTTATTGGAG
AACGATGTTT TGCAAGGTTT TGAAGATTTC TGTTCTTGGA AAGCACGAGA TGACGTTGTG
TTGGCCACAG AAAGTTTGAA ACAATCCGTA GAAGGAATAG GAAAAATTAC TGGCGATGCT
ATCGGCGTGG AAGAGATTCT TGGAGTAGTC TTTTCAAGTT TTTGCATAGG CAAATAG
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| Protein sequence | QPTIYALSTK LGRAAIGVIR VSGPESKYVF NKLTNTKTQP KHRVASVRKL YSPKSGILLD
EALTLFFNSP NTYTGEDLLE LHLHGGTAII KSVLAAIKEL HDPKKGINIR YAENGEFSSR
AFVNGRFDLT EIEGIRDMID AETETQRIAS LSSLTGNTKE LFSQWRVGIL NNIALMTTLI
DFGEDHDLEE TAQLFDNVEE NIKKLEQEIH KYLQKVRSSE TLLRGIRMVL LGPPNAGKSS
LLNLLANEDA AIVSDIAGTT RDIIDVPLDI NGYKVVIGDT AGIRDTESAD KIEIEGMKRA
IAKSYNCDLI LAVLPFETDN KSDLHQLISH LSSLRELNRP VLVVLNKEDL IKNLGEKQEL
LKYFSEKLQI SPEYFHVVSC LTGGGINSLK SALSHTFRAI TSSETTDPII ISSRAQDLLE
NDVLQGFEDF CSWKARDDVV LATESLKQSV EGIGKITGDA IGVEEILGVV FSSFCIGK
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