Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56149 |
Symbol | |
ID | 4837200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2010402 |
End bp | 2011514 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388515 |
Product | predicted protein |
Protein accession | XP_001382614 |
Protein GI | 150863957 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.462379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.700451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTACA TCAAGAATCA GTATATTCGT TATATACGAA AAAAGCCTTT ATCATTGATA GCACCGATTT CCGTGTTATT GCTCGTGTAT TTCTACTTCT TTGCGGCACA TGGCTCTTCC TCCTCATCTT CTGGCAACAA ATACAGCTAC AAGAAGAAAT CCCGAGGTTT GTTTGCAAAG AACAGAGACC TGGTGATTCT TAAAAACTTG CCTAAGAATC ACATCAGCCA CTACGACTTG AACAAGTTGT CCACTTCTGC CGATTCGCTT GCAAAGAAGG AGGAGGTGTT GATTTTGACG CCCATGTCAC GTTTCACGCC ACAGTACTGG GATAACATCC AGAAGTTGAC GTATGAACAC AGCTTGATTC TGTTGGGATT CATTTTGCCT CGTAACAAAG ACGGTGATGT AGCACTTAAG CATTTGGAAG AAGCAATCAA AGACGCCAAA GCGGCCAACC AGTTGAAATA CAAGAAGATC ACCATATTGA GACAAGACAC GAACTCTCTT AACTCGCAGT TGGAGAAGGA CAGACATGCA CTCAATGTGC AGAAAGAAAG AAGACTGATG ATGGCTCTTG CCAGAAATTC GTTACTTTTC ACGACTATTG CGCCAACTAC GTCTTGGATT TTATGGCTAG ATGCCGACAT CGTAGAAACT CCTGCTGGAT TGATTCAGGA TTTGACGTCA CACAATAAAC CAGTTATTCT GGCCAACGTG TACCAGAGAT ACGAAGACGA ATCGACACAA CAACCATCCA TCAGACCGTA TGACTTCAAC AACTGGGTAG AATCAGAAGA AGGCTTGAAA ATCGCTGCAG GTTTGGCAGA CGACGAGATT GTAGTTGAAG GTTACGCTGA GATGGCTACC TACAGACCGC TCATGGCTCA TTTCTATGAC GCCAAAGGTG ACGTCCATAC CGAAATGCAA TTGGATGGTG TTGGAGGAGG TGCTGTCATG GTCAAGGCTG ATGTCCACAG AGATGGAGCC ATGTTCCCTT CGTTTCCATT CTACCATTTG ATAGAAACAG AGGGTTTTGC CAAGATGGCT AAACGCTTGG GCTACGAGGT GTTTGGTTTG CCCAACTACT TGGTATACCA CTTCAACGAG TGA
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Protein sequence | MVYIKNQYIR YIRKKPLSLI APISVLLLVY FYFFAAHGSS SSSSGNKYSY KKKSRGLFAK NRDSVILKNL PKNHISHYDL NKLSTSADSL AKKEEVLILT PMSRFTPQYW DNIQKLTYEH SLISLGFILP RNKDGDVALK HLEEAIKDAK AANQLKYKKI TILRQDTNSL NSQLEKDRHA LNVQKERRSM MALARNSLLF TTIAPTTSWI LWLDADIVET PAGLIQDLTS HNKPVISANV YQRYEDESTQ QPSIRPYDFN NWVESEEGLK IAAGLADDEI VVEGYAEMAT YRPLMAHFYD AKGDVHTEMQ LDGVGGGAVM VKADVHRDGA MFPSFPFYHL IETEGFAKMA KRLGYEVFGL PNYLVYHFNE
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