| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56077 |
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| Symbol | PAL2 |
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| ID | 4837203 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 417764 |
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| End bp | 419584 |
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| Gene Length | 1821 bp |
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| Protein Length | 565 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388518 |
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| Product | transmembrane protein |
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| Protein accession | XP_001382315 |
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| Protein GI | 150863743 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00164945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAC TGCTGCTTCT CTTTCTACAA GAGCAGAATG TGCCCATAAA CTGCTCAGTG
TATTCCCTTA CACTGGGTTT CATCCAGTTC CAGGATTTCC GGCCTCCCTA CAGTCCTGCC
TTGGACTCTC CCAGTCCCCA TGGCCCACAC TTTCCAGCCT GGAACAACTG GCTGAGCGAG
TTCCTTCCAG CTTATTACAT AACAAACTGT CTGATCCCCG ATCTCATCCA GTTGGTGATC
GAACTGAACA TCACAGGCAC AGATGACCAA CAAGATAAGC TTATCAACTC TCCCTATAAC
GACCGAGACA ACGGCGACAC ATTCGTAGCT TTGCTATTCA TGGTCTGCGG CTCGTGTGTA
TCCAGTTGGA TGCTTGCCTT GCTTCACTAT CTATCACCGA AACACAAGAG AAAACCGCTT
GTAGTCCAGC TTGCTACCAT AATGTACTCT GTAGTGATGA CAATTCTGCT TTCACGACTC
ACTGATGGAT CGTCGCAGGA ATACTACAAG GATACACTAG ATATAGTGCG GCTCCACGAA
CTCATATACA ACAACAATAC CTATAGGATC ACAGTAGTAA TTTCCCAGAT CCTCACCCAG
GTGGCGTGGT TTCAGATCGT CCTCAAAATC ACGAAAACGA AGTGGAAATG GCTCACTTCC
TGTTATGGTG CAGTCGTAAT TTCTGCCCAT ACAGCAGTCA ACATTTTCTG CCAGGTCAGG
TACAACAACA CCGACTCGAT CTTTGACAGC ACCAACGCGA GCTTCGACCG CTGGGCTCTG
GCACGTGTCG TTATCAAACT CATGCTCGTA GTCTGGTTTG GAGGTAGTTT ACTCTACTAC
ACCATTGTTA TCAAGAATCC ACACAAAGTG TGCTATTCAA GACGTTTGCT TCCACTAGGA
ATCTTCAACT GGTTCCTCTT CGCTTTGCAC GTTGTACTCT CCATTCTCAT CATATCTCTC
TTCAGAGACA ACTGGTTAGT CAACACCTGG TTGTTTCTAC TTCCAATGCT CATAGAGGTC
ATCTTCTTGA CAACCGTATG GGAATGGGTG TGTAATATTC GTTTCTTAGA GAAACGGTTT
GAGATGATGG GCGTACTTGG AAGACGAATC AGCCTTGAAG ATATCGCCAG TTTGCATCTG
CAAAGTGGAA AGATTCGAAA AGTCGAAGTG ATGACCAATT TTATGAGTAA ATTTTACAAA
AGAAACCACG TAGTAGCCAA AGACGACACG GACAACTCGG TGGAGATGAA AGACTTTTCA
GATAACTCCA ACGAGTCTAC TGATGCTACT ACAAAAATCA ATAGCGACTT GTCTGCTACC
AGATCAGTGA CCACAAGAAC ACACAGTGAT AATACATTAG AAATTCACAA TCTGCAACTT
GAAAACGAAA ACAGTAATAA TGAAAACAAC TACAATTATA ACGATAATGA TAATGACAAT
AATAATGACA ACGCCAACAA TACTAATAAC AATACTAATA ACAACACCAA CAATATTGTT
CACAGTAATC AAACCCTTAA TTTCAACAAT ATAATGGACA ATAGCCAAGA TAGCCACAAT
ATGAATCTGT ACCATATAGA CACTGGTGAG GGAGATTCTT CATCACATCG TCGTAGTGCT
GGTAGCTGCG ACGACGAGTA CATCAACAAC TACGAAATCT GGGCCGACGA CGAAGATCAG
GAGATTGATG ATTCTACGCA AAATATAGAC TACGATTATT CACAATTTGA GGCTGGACCC
TCGGAAGCTC CTCCACCATT CCAACCGCAT CCGGGGTTTT CCACCGGCGA CTACTGGCAG
GACCATAAGG AGCACATGTA A
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| Protein sequence | MAISSLLFLQ EQNVPINCSV YSLTSGFIQF QDFRPPYTWN NWSSEFLPAY YITNCSIPDL
IQLVIESNIT GTDDQQDKLI NSPYNDRDNG DTFVALLFMV CGSCVSSWML ALLHYLSPKH
KRKPLVVQLA TIMYSVVMTI SLSRLTDGSS QEYYKDTLDI VRLHELIYNN NTYRITVVIS
QILTQVAWFQ IVLKITKTKW KWLTSCYGAV VISAHTAVNI FCQVRYNNTD SIFDSTNASF
DRWASARVVI KLMLVVWFGG SLLYYTIVIK NPHKVCYSRR LLPLGIFNWF LFALHVVLSI
LIISLFRDNW LVNTWLFLLP MLIEVIFLTT VWEWVCNIRF LEKRFEMMGV LGRRISLEDI
ASLHSQSGKI RKVEMKDFSD NSNESTDATT KINSDLSATR SVTTRTHSDN TLEIHNSQLE
NENSNNENNY NYNDNDNDNN NDNANNTNNN TNNNTNNIVH SNQTLNFNNI MDNSQDSHNM
NSYHIDTGEG DSSSHRRSAG SCDDEYINNY EIWADDEDQE IDDSTQNIDY DYSQFEAGPS
EAPPPFQPHP GFSTGDYWQD HKEHM
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