| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55999 |
|---|
| Symbol | |
|---|
| ID | 4837635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 2433369 |
|---|
| End bp | 2433848 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640388950 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382693 |
|---|
| Protein GI | 150864018 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5030] Clathrin adaptor complex, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.226774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT ACACTCCAGT AGATATACCC ACACAGATAC TATTGGTTCA ACAAGTTTAC
AAGTTGATCT CTTCTAGAAC AGCACTGGAA TGTTCTTTCA TTACGCCTCC TTCATTGTTA
GAGGACTTGG ACGATATCAT GGTGATCTAC AGACACTATG CTACACTTTA TTTTGTATTC
GTAGTCGACG ACCAAGAGTC GGAGTTAGGA ATCCTTGATT TAATCCAGGT ATTTGTCGAA
TGCCTCGACA AGTGCTTCAC TAACGTGTGT GAGTTGGATT TGGTGTTTGG CTGGCAGGTA
TTGCAGACAG TCTTGGAAGA AATTATTCAG GGAGGCATGG TTATTGATAC AAATATCAGC
CGCATTGTAG CGGCAGTCGA TGAGGCCAAT AGTCAGAAGA GTAGTACAAC GTCTGCTAGC
AGTATAAGTG CCTCTTTCTT GCTGGCTGTC TCCAGGGATA GAAGCTTCTG GGGAAGATGA
|
|---|
| Protein sequence | MKFYTPVDIP TQILLVQQVY KLISSRTASE CSFITPPSLL EDLDDIMVIY RHYATLYFVF
VVDDQESELG ILDLIQVFVE CLDKCFTNVC ELDLVFGWQV LQTVLEEIIQ GGMVIDTNIS
RIVAAVDEAN SQKSSTTSAS SISASFLSAV SRDRSFWGR
|
|---|
| |