| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55973 |
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| Symbol | SEC6 |
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| ID | 4836758 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 575625 |
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| End bp | 578150 |
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| Gene Length | 2526 bp |
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| Protein Length | 825 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388073 |
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| Product | exocyst complex subunit |
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| Protein accession | XP_001382870 |
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| Protein GI | 150864156 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5173] Exocyst complex subunit SEC6 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.297575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC AGGCTATAGC GAGGATCGCC CATCTCATCA AGGTGGAAGA CGATTTGACG
AAAATCGCTT CTTTTCGCCA GCAATTCGTT AAGGAAAAAC AATCTGTAGA TGTCAAGTTG
AGTTCAGCCA CAAGCTTACA GATCGATTCC ATCATGGGAA ACCTTTCCAA GTTGAATAGT
GCTGCTGTCA AAATCAATGC TATCAAGCTG AACATCAACA AAGTGAATCT GATCTACGAT
GACTCCATCA CTAACATTAA AGATTACGAT ACGATCCGAA AGATGACTTC CGTCAACCAG
TTCTTGACTC AGGTCAACAG TCTTTGCTAC GACATCCGGC AATTTCGAGA CCACTTGTTG
CGACTTGATA GGCGGATAGA GGAAGAGCTC GAACAGTTGC AGTCGAGCTT GACTTACACG
TTGCCGAATC TCTTCCTGAT CCATTACGAG TTGACTCAGG CTCGTAATTT CCTGGAGTAT
TTGGAAGTGT ATTCGCGGGA GTTGTCGGAC GACTTCAAAT CCATCATATA CAAGATCATC
GATCCGATAA AGCGGACAAT TGGCAACTTC CAAGAGTTAT TGGGTGAGGC TATTATCAGT
CTTACAGAAG TAGTTAAAGA TGGCAACGTC CAGCTTGTCC ACCGCGTCGT AAAAATCGTA
GAATATGAGT CGAATGAAGA TTTGAAGTTT TCTCTTATGC AGAGTTTAGG CTTGAATCAG
TCTCGAGACG TCAAGACTAT CGACTATGCC AGTTTTCGGG GCCGTAGAAG AAATTACAGA
AAGTTCTTCT ACGACAAGTT GGAAGAAAAC CTTTCAGAGA CTTTCAACGC CTGTATCAAT
CATTTTTCCG AGGACAGAAT GCTTGTGTAC GAGAATTTGG ATTGGTTAGA AGACGAATTG
ACCTTCATCA CCCAACGTTT GGCTCCTCTC TTTCCAGCCA GCTGGGAAGT AGACACCTTC
ATAAAGAACG TGTACTACAA CAAGTTGCAC AAGTTTACCA TGGAAGTGAT CAACACGGAT
CCCCCGGCAG AAGACTTGAT GAAGATCTTG GCGTACGACT CGCACTATAG TAAATTTGTA
GGAGCACTCC AGACGTCAAA TGACGAAGAT GGTGAAGGCA GAAGAAAATC CGTGATAAAG
CAGGACCAAC GCTCGATCAT CGGCGAAGAC TTGAAGAACG TTGTGCTTGA AGACTACTTG
AAGGTTATCA CGTTGAAGAT GGAGGAGTGG AATGTAAACT TGATGAAGCA AGAGACTACT
GCATTCACGT TGAGGGCCAC TCCTCCAGAT CTCTATAACT ATAGCCAGAT CATCGAAGAT
GAAGATATCC AAGATAACAT CATCACTCTT GAAGTCGACT CAGACATCTA CGTTTTACCT
GATTTCAAGA CACCATTGAC TATGCTCAAA GAACAAGCAG ATGTGGCTGC AGACTCAGGC
TATTCTAAGA TCTTGGTAGG TGTTTTAGAG CATTGGTCTC ACAACTACAT CAAGCGTATT
ATCAACTATC AACAGATTAT CGAGGAAGAG TTTGACAAGT ACATGTCAGT CTACAACAAC
GAGCGGTTCT TGCTCAAGGA AAGTAAAACA GAAAGACTTT TTAGACGTAG AAAGAACGGT
GAACAGCAGT TTGACATTGA GAACATGACC CAAGAGGAAT TAGAACAAAT CTCCAAGCCC
GGGTTGATTG AGTACTTGAC TGCTTTAGGC AACACCTTTG AGATAAACAC TGACAGATTA
CAGGATAAGT TCTTACCAAA CTACTTGGAA AAAGTTCACA CCAGCTATCA TGGCAGAATC
AAACAGGCGT TTGAGGAAAC TTTGACTCCT AGCACGGAGT TAAATGCTCA GGTGATCAGA
ACCGTAGTGG ACATTATTGT GAACGATTTG TACCCTGCAT TGTCTTCTGT GTTCACCAAA
GGCTGGTACG ATGAGGGCAA TACCCAGACC AATGACGAGC CTGGTATGGT TCAGCGATGC
GTGGAAACAA TAGGCGAGTA CATGGAAGAA TTACGAGGCT ACTCTTCCTA CGAAATTTAC
CTGGTAACTT TCAATATCTT GTTGGACACT TTCATCCAGG CCTATATACG GATCGGATAC
GAAAACATTT TGCATGGGAG TGGAAAGAAA ATCGATCCTA CTGCTGTGAA GAAATACAAG
TCGTTCAGTG AAGGAATTGG TCGTGATGTC ACTGTCTTGT ATGGAAGTCT CGAAGGGTTG
TTTACCAGAA AAGATTCTGC TTATTTGTTA AACAGTTTGC GTGCCATAGA GTATTTGGGT
GATTTGGGTA CCTGTTCTGA TCCTCTTGAG ACTATTCCTG ACATGTGGGA ACACGAGATA
TTAAGCTCGT TCTACTACTG TTCTGTAGAG TATGTGAGAG GTATCTGTTT GTGTAGGAAA
GACATGGACA AGAATGATGT CCACGCATTG GTGTTGAAGT TGACAGATAT CCAGAAGAGA
TATCAAGCTT CTGTTGATCC TCCAGCTATG CCAACTGGGA CGTTGAACGG TTTCATATTT
AAGTAG
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| Protein sequence | MSDQAIARIA HLIKVEDDLT KIASFRQQFV KEKQSVDVKL SSATSLQIDS IMGNLSKLNS
AAVKINAIKS NINKVNSIYD DSITNIKDYD TIRKMTSVNQ FLTQVNSLCY DIRQFRDHLL
RLDRRIEEEL EQLQSSLTYT LPNLFSIHYE LTQARNFSEY LEVYSRELSD DFKSIIYKII
DPIKRTIGNF QELLGEAIIS LTEVVKDGNV QLVHRVVKIV EYESNEDLKF SLMQSLGLNQ
SRDVKTIDYA SFRGRRRNYR KFFYDKLEEN LSETFNACIN HFSEDRMLVY ENLDWLEDEL
TFITQRLAPL FPASWEVDTF IKNVYYNKLH KFTMEVINTD PPAEDLMKIL AYDSHYSRRK
SVIKQDQRSI IGEDLKNVVL EDYLKVITLK MEEWNVNLMK QETTAFTLRA TPPDLYNYSQ
IIEDEDIQDN IITLEVDSDI YVLPDFKTPL TMLKEQADVA ADSGYSKILV GVLEHWSHNY
IKRIINYQQI IEEEFDKYMS VYNNERFLLK ESKTERLFRR RKNGEQQFDI ENMTQEELEQ
ISKPGLIEYL TALGNTFEIN TDRLQDKFLP NYLEKVHTSY HGRIKQAFEE TLTPSTELNA
QVIRTVVDII VNDLYPALSS VFTKGWYDEG NTQTNDEPGM VQRCVETIGE YMEELRGYSS
YEIYSVTFNI LLDTFIQAYI RIGYENILHG SGKKIDPTAV KKYKSFSEGI GRDVTVLYGS
LEGLFTRKDS AYLLNSLRAI EYLGDLGTCS DPLETIPDMW EHEILSSFYY CSVEYVRGIC
LCRKDMDKND VHALVLKLTD IQKRYQASVD PPAMPTGTLN GFIFK
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