Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55876 |
Symbol | |
ID | 4837555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 738695 |
End bp | 739885 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388870 |
Product | predicted protein |
Protein accession | XP_001382908 |
Protein GI | 150864184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0416989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.862936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA CCTTATCGCT CCAGAGTAGG GCAAAAACGA CTGCTCTCAA GCAGCCTAAA GAGATTTTTG CTTTTGCTCG AGACATAGAC GGCGAATTCG TGTACGACCA GAAAATAGTC AAAGACGAAA ACGTATCGTA CTACTACTTG CCAGACTCCA AGATTGATGG AAGCATCGAC TTGCAAGCTG GGTACGCCAA ATTCAAAAAA ATCCCAGAAG AGAAGAACAT GCTGGATATG AAGTGTTTGC TTACGGCACT CACGAAGTAT GAGCAAGAAC ACAACAACGG CGAAAAAGTA AATGTAGATA TCATCACATA CCGAGGGTTA ATGACTAAAT TGCTTGCTTT ACCATACAAC TTGAACGACC CTGTAGATCT CAATGTACTA GCCTATGATG GACAATTGTT TATCAACAGC GACGAGGAGA TCGAATTGGC AAGAAGAAAA GAAGAAGACG AGCACAAACA ACAGAGTATG ACTCCAGAAA AGTATGATCA CATGAAGCGG TGTGAATTTA GCGGATACAA GTTTGAAGCC ATAGCCACAT TGCCCAAGCC CTGGGCCGAC TGTAGTCGTC AACAAATCGA TAAAAGAGGC AAGAAAATGG TGAACAACTA CGAACAGTAT ATTTCAGTAA TAAAGACTGG CATTGGTGAG GCCAAGATGC TTTTGGCAGG AGAAGTGGAC TGTGTGTGGG ACTATATTCC AGAAGACGGA AAAGATGTTC TTTCACATTA TATGGAGTTG AAGACAACTA GAATATTGGA GTCGAACGGC CAGGTGGTCA ACTTTGAAAA GAAGTTGTTC AAGACGTGGG CCCAGTGTTT CTTGATGGGT ATCCGTAAAG TGGTGTACGG ATTCCGTGAC GATTCGTTCT TCTTGCGCGA CGTCGAGTTG TACAAGACGG AGGAGATCCC GTTGCTAATC AAGAACAATG CGCTTACTGA GAACAAATCC GGGGGAAAGA TCAACTGTAC CACTGCCTTG AAATGGTATG GAGCAGTCAT TGAATGGCTC TTGCAGGAGA TTCCAAGAGA CGATACTTCC AAGGCCTATC GAGTGAGTTT TGATCCAAGC ACAAGAACTT TCACGTTAAG AGAGTTGATG GGTAATGAGA ATAGTAGGTT GAGAAACGGC GAGATGTTGA CCTCGGAATT CAAGCAATGG AGAGAAAGCA TCCAAAAGTG A
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Protein sequence | MMKTLSLQSR AKTTALKQPK EIFAFARDID GEFVYDQKIV KDENVSYYYL PDSKIDGSID LQAGYAKFKK IPEEKNMSDM KCLLTALTKY EQEHNNGEKV NVDIITYRGL MTKLLALPYN LNDPVDLNVL AYDGQLFINS DEEIELARRK EEDEHKQQSM TPEKYDHMKR CEFSGYKFEA IATLPKPWAD CSRQQIDKRG KKMVNNYEQY ISVIKTGIGE AKMLLAGEVD CVWDYIPEDG KDVLSHYMEL KTTRILESNG QVVNFEKKLF KTWAQCFLMG IRKVVYGFRD DSFFLRDVEL YKTEEIPLLI KNNALTENKS GGKINCTTAL KWYGAVIEWL LQEIPRDDTS KAYRVSFDPS TRTFTLRELM GNENSRLRNG EMLTSEFKQW RESIQK
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