| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55810 |
|---|
| Symbol | RRP7 |
|---|
| ID | 4837400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 556614 |
|---|
| End bp | 557489 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640388715 |
|---|
| Product | Ribosomal RNA processing protein 7 |
|---|
| Protein accession | XP_001382342 |
|---|
| Protein GI | 150863762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.748096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.853215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTCG CTACTGAGAT CAAGGGCTAC AACGTGTTGC CTGTGCTGTT GCCGAAGGCT
CAGACCACCC ATTATATATA TTTTAAGAAG CACGAGACTA GATCTACCGA TAACCAGAAG
AATAGCAGTG GAAGATCCAT CTTCTTATGC AACCTACCCA TTGGAACAAC CACGTCCACA
CTCAAGAAAT TCTTTCAGGA AGTCGCTATC GGTGCCACTA TCGAAACTTT TGTTGCAAGT
TTGTTAAATG ACTGCCCTGA GGACGTGTGG ATCAATTTGA CGAAACTCAC ATCTGATCTT
GAGTTCAATC CCGACTTGCA ATCGGCCAGA AACACCAACG ATGAGGCTGC CAGATTGCCC
AAAAACTGTG GTGTAGTAAC TTTTGTAGAT AAACTGGCCT TCCAACTTGC TTACACTGCC
ATCAGGAAGT TGTCTGCAGC CAGAACTGTA TCTTCATGGC CGTTTTCAAC CTACGATTCC
AAGTACTTTT TAAACCACTA CAAGTCACAG ATTCTTGATG CCGAAGCTTT GTCTGATGCG
GTGTCACAGG CCCTTGTAGA CTTTGATAGA GCCGAACAGG AGTCTCGTGA TAACTTGCAG
CAGCAAACAC AGTTGGTAGA CGAAGACGGA TTTACTTTGG TTGTAGGCTC TCATAGAAAA
ACAAAGGCTG GGATCATGGG CAAACAGAAG CTTGCCGCCA CCGTTGAGTT GGACAAGGCC
AATACCAAGT TGAAAAAGAA GGAAAAGGAA GATTTCTACC GTTTCCAGTT AAGACAGAGA
AAAAAGGACG AAATGAACGA GTTACTCCAG AAGTTCAAGT TGGACCAGGA AAAGGTCCGT
TTGATGAGAG AAAAGAAGAG ATTCAGACCC TATTAG
|
|---|
| Protein sequence | MVLATEIKGY NVLPVSLPKA QTTHYIYFKK HETRSTDNQK NSSGRSIFLC NLPIGTTTST
LKKFFQEVAI GATIETFVAS LLNDCPEDVW INLTKLTSDL EFNPDLQSAR NTNDEAARLP
KNCGVVTFVD KSAFQLAYTA IRKLSAARTV SSWPFSTYDS KYFLNHYKSQ ILDAEALSDA
VSQALVDFDR AEQESRDNLQ QQTQLVDEDG FTLVVGSHRK TKAGIMGKQK LAATVELDKA
NTKLKKKEKE DFYRFQLRQR KKDEMNELLQ KFKLDQEKVR LMREKKRFRP Y
|
|---|
| |