Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55763 |
Symbol | |
ID | 4837115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2659535 |
End bp | 2660119 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388430 |
Product | predicted protein |
Protein accession | XP_001382744 |
Protein GI | 126132438 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA TTTTAGGAAT AAGAGTAGCT GATGGTACGA TCATTGCCAC TTCCAAGGCT GCCACCAGGG GTATTTCGAT CTTGAAGGAC ACTGATGACA AGACCCGTGT CTTGAACAAG CACAACTTGG TTGCCTACAC TGGAGAATCA GGTGACACTG TCCAGTTTGC TGAATATGTC CAGGCTAACA TCCAACTATA CTCTATGAGA GAAAACGACA TTGAATTGTC GCCTAAGGCT ACAGCATCTT TTGTAAGAAA CCAGTTGGCC ACTTCTATTA GATCACGTAA GCCATACCAG GTTAATGTAT TGATTGGTGG GTATGATACA AAGTCAAACA CTCCTTCATT AAACTGGATA GATTATTTGG GCACACAGGT AGAATTGCCG TATGGAGCAC ATGGCTACGC TGCATTCTAC GCCAACTCGT TGTTGGACAA GCATTACAAG AAGAACATGG ATGTAGAGCA GGGCTTGGCG TTGTTGAAGA TGTGTTTGAA GGAATTGGAA ACGAGAATGC CAATTGACTT CAAGGGTGTA TATGTCAAGG TCGTAGACAA GGACGGTATA AGATCGATTG ACTAG
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Protein sequence | MDIILGIRVA DGTIIATSKA ATRGISILKD TDDKTRVLNK HNLVAYTGES GDTVQFAEYV QANIQLYSMR ENDIELSPKA TASFVRNQLA TSIRSRKPYQ VNVLIGGYDT KSNTPSLNWI DYLGTQVELP YGAHGYAAFY ANSLLDKHYK KNMDVEQGLA LLKMCLKELE TRMPIDFKGV YVKVVDKDGI RSID
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