Gene PICST_55763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55763 
Symbol 
ID4837115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2659535 
End bp2660119 
Gene Length585 bp 
Protein Length194 aa 
Translation table12 
GC content43% 
IMG OID640388430 
Productpredicted protein 
Protein accessionXP_001382744 
Protein GI126132438 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA TTTTAGGAAT AAGAGTAGCT GATGGTACGA TCATTGCCAC TTCCAAGGCT 
GCCACCAGGG GTATTTCGAT CTTGAAGGAC ACTGATGACA AGACCCGTGT CTTGAACAAG
CACAACTTGG TTGCCTACAC TGGAGAATCA GGTGACACTG TCCAGTTTGC TGAATATGTC
CAGGCTAACA TCCAACTATA CTCTATGAGA GAAAACGACA TTGAATTGTC GCCTAAGGCT
ACAGCATCTT TTGTAAGAAA CCAGTTGGCC ACTTCTATTA GATCACGTAA GCCATACCAG
GTTAATGTAT TGATTGGTGG GTATGATACA AAGTCAAACA CTCCTTCATT AAACTGGATA
GATTATTTGG GCACACAGGT AGAATTGCCG TATGGAGCAC ATGGCTACGC TGCATTCTAC
GCCAACTCGT TGTTGGACAA GCATTACAAG AAGAACATGG ATGTAGAGCA GGGCTTGGCG
TTGTTGAAGA TGTGTTTGAA GGAATTGGAA ACGAGAATGC CAATTGACTT CAAGGGTGTA
TATGTCAAGG TCGTAGACAA GGACGGTATA AGATCGATTG ACTAG
 
Protein sequence
MDIILGIRVA DGTIIATSKA ATRGISILKD TDDKTRVLNK HNLVAYTGES GDTVQFAEYV 
QANIQLYSMR ENDIELSPKA TASFVRNQLA TSIRSRKPYQ VNVLIGGYDT KSNTPSLNWI
DYLGTQVELP YGAHGYAAFY ANSLLDKHYK KNMDVEQGLA LLKMCLKELE TRMPIDFKGV
YVKVVDKDGI RSID