| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55665 |
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| Symbol | SHY1 |
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| ID | 4837150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1827902 |
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| End bp | 1828981 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388465 |
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| Product | mitochondrial protein involved in respiration |
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| Protein accession | XP_001382576 |
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| Protein GI | 150863927 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3346] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.585569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCAT TGAGGTTTTC CAGGAACTTT CATCTCAACA AAACGACTAT CAGAACCGTC
AAGACATCCA CCGTGGACTG GAAACCGATT ATATCTACGA AGGGAAACTT GGCAACAATT
GAGTATCAAT CTAAGATGCC CTTGTTGAGA AAATTCTTCC TCGGCTTGAT GATAGCTATG
CCTGTTATTT CGTTTGTATT AGGCTGTTGG CAAGTTAAGA GACTTCAGTG GAAGACAGCT
TTGATATCCA AATGTGAGAA CGCTTTGGCG CAACCACCCA TTGAAGAAAT TCCGGCCGAG
CTCGATCCAG ATGCTATTGT AGACTTTGAG TACCGTAGAT TCAAATGTAA GGGACATTTT
GACTACGATC AAGAGATATT CTTGGGTCCC AGAATCAGAG ATGGCCAGTT AGGATATTTG
GTTATCACTC CGTTCGTCAG AACTTCTGGC GGAAAGCCTA TTTTGGTTGA AAGAGGCTGG
ATTCACAAAG ATAAGGTAGT TCCAGAAACT AGAAAACATG GCTATTTGTC TCATTTGGCA
TTTCCTCAGG GTGAAATCGA AATCGAAGCC TTGTTCAGAG TGATGCCAGT TAAGTCGTAC
TTACAATTTG ACCACCAAGA TGGAGCCAGA CTCTTCAATG TTCATGATGT GCCGGAAATG
GCCAAGCAGT CTGGCGCTTT ACCTATTTAT TGTCAGATGA TATATGATCT TAGAGACCAT
GTGGACTGGA AGGGCCCCGA TGATGCCAAA AAACCTGCTA GCAAAAGTTC GTGGTTGAAG
TCGCTTGCTT TTGCTCAGAA GCAAGAGCCA CAGGACGATG CCCATTTCAT CTCATCTCAG
GCTGAATTCG ATCACACTTT GGAATACCAA GATTTTGAAT TCGTCAAGCA GGGTGTACCT
ATTGCACCCA CACCCAAGTT GAAGTTCAGC AATAACCACT TGCAGTACCT TGTGACATGG
TTTGGACTTT CAATTTGCAG CGCTGGACTT TTGATTTACA GTTTTATGAA GAAGGGAAGA
TACCTGAGTG CTGAAAAAGT GATTGCTGAG AAGAGAAGAC AGATGGGAAG AACATTCTAA
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| Protein sequence | MVPLRFSRNF HLNKTTIRTV KTSTVDWKPI ISTKGNLATI EYQSKMPLLR KFFLGLMIAM
PVISFVLGCW QVKRLQWKTA LISKCENALA QPPIEEIPAE LDPDAIVDFE YRRFKCKGHF
DYDQEIFLGP RIRDGQLGYL VITPFVRTSG GKPILVERGW IHKDKVVPET RKHGYLSHLA
FPQGEIEIEA LFRVMPVKSY LQFDHQDGAR LFNVHDVPEM AKQSGALPIY CQMIYDLRDH
VDWKGPDDAK KPASKSSWLK SLAFAQKQEP QDDAHFISSQ AEFDHTLEYQ DFEFVKQGVP
IAPTPKLKFS NNHLQYLVTW FGLSICSAGL LIYSFMKKGR YSSAEKVIAE KRRQMGRTF
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