| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55602 |
|---|
| Symbol | TAH13 |
|---|
| ID | 4836701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 49480 |
|---|
| End bp | 51291 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388016 |
|---|
| Product | NADPH-ferrihemoprotein reductase |
|---|
| Protein accession | XP_001382236 |
|---|
| Protein GI | 150863682 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGC AAGTGTCGAG TCTGGATGGA GTGACAATAC TTTATGGATC CGAGACGGGA
AATGCCGAAG ACTACGCTCG TTATTTGAGT CTGCGCCTAG AATACTACCA AATCAGTGCA
ACTCTTTCAG CACTAGATGA TTATCCACTA AAGCAGCTAG TTACAGAAAC GAGATACCTT
ATCATAATAT GCTCGACGAC TGGCCAGGGT GAACTTCCAA GAAATGCAAA AAAGTTCATG
AAGTTTCTTC TCAAACGGAA GCTTCCTTCT GATCTACTTA ACCATATTCA TCTTTCCACA
CTTGGCTTGG GAGACTCTTC CTATGTCAAA TTTAACTATG CCATCAAGAA GTTACACACT
CGTCTTTTCC AGTTGGGATG TAGCGAGCTT TCGCCTCGAT GTGAAGCTGA CGAGATGTCG
CCTCAAGGTG TAGATGGTTT CTACAAGGAA TGGGAATCAC AGTTGGTGGA TTCGTTGCTA
AAGTTCTTCC CCAATAAAAT TCAATTGGAC GACTCTATGT TATCATATCC ACGGAATCAA
GTGGTTATAG ATAACTATGC TGATGTAGTG GATACCGTGT CTCACTCTGC ACTTGTGTCC
CAATCGAGAA AGCTGCCTGA AGACACGTCA TTGCATTTCG GTATACTTAA GAAAAATGAA
CGGGTCACTA GTGCCGATCA TTTTCAGGAT GTCAGGCATG TCGTAATTGA GTCGGACAAC
TTGAAATACT GTCCAGGTGA TACCGTAGCC TTATATCCGT CCAATGACGA CCAAAGTGTA
GATCTTCTAA TTCAACTGCA ACCGCATTGG GTTACAATAG CAGATAAGCC TTTGACAATT
CACGGAAAAT TGCCCACTGT CGATGGTGGA CTTATAGATA CAAAGTATCT CACCTTGAGG
TCACTTTTAA CACACCACTT GGACATTGCG GCTATTCCAA GAAGATCGTT CTTTTTCAAA
TTATGGCATT TTGTAGATTC TTCGACCGAG GATGGTGTAC GTGAACAAGA AAAACTTAAA
GAATTTGGAG GTCTTGAGGA AACTGACGAG TTGTACGATT ATGCAAATAG GCCAAGACGG
CTGATATTAG AAACCATTTT GGAATTTCAT CAGAATTTGA AAATACCTAT TGAGTACGTG
TTCGATTTAT TTCCAACAAT CAACCCGAGA TACTTTCTGA TAGCATCAAG ACCCAGCTCA
ACAAGTGTAG AATTGGTGGT TGCAATAGTA GAGTACAAGA CTATAATCCG GCGTATCCGT
AGAGGATTAT GTTCTAGGTG GTTGAAGCTG CTAACCCTTG GTGATAAGCT ACTTTTCTCC
GTCCAGAAAA TGGACATGGT CTTCTCACTT CCGGGATTGG AAAAGCCACC AATAATCATG
GTAGCACCAG GCACAGGTAT TGCGCCGATG AAATCTTTAA TAGAGTACGT TACTTCCCTG
GACAAAGATC AGGAGTTATA TCTTTTCTAT GGATGCAGAT ACAAAGAAAA GGATTATCTC
TTTCCTAAAT TATGGGATCT GCTCAGCAAG AGTAACAAGC TTAATATATT CCCCTGTTTT
TCTAGAGATG AGGGATCAAA GATCCATTAT GTTCAAGACA TGCTTTTCCA CAAAAGTCTG
TTGGTCGGAG ACTTGATCTT GAATAGAAAT GCAATTGTAT TTGTTTGCGG GTCAAGTGGA
AAAATGCCTA AACAAGTTAA GCTAACCTTC AGCGAGATCT TACATAAGCA GGGCAATTTG
AAAGAGAATG ACGTGCAACA GTATTTATTG GATATGGAAA ACCAATGTAG ATACAAAGAG
GACGTATGGT AG
|
|---|
| Protein sequence | MAEQVSSSDG VTILYGSETG NAEDYARYLS SRLEYYQISA TLSALDDYPL KQLVTETRYL
IIICSTTGQG ELPRNAKKFM KFLLKRKLPS DLLNHIHLST LGLGDSSYVK FNYAIKKLHT
RLFQLGCSEL SPRCEADEMS PQGVDGFYKE WESQLVDSLL KFFPNKIQLD DSMLSYPRNQ
VVIDNYADVV DTVSHSALVS QSRKSPEDTS LHFGILKKNE RVTSADHFQD VRHVVIESDN
LKYCPGDTVA LYPSNDDQSV DLLIQSQPHW VTIADKPLTI HGKLPTVDGG LIDTKYLTLR
SLLTHHLDIA AIPRRSFFFK LWHFVDSSTE DGVREQEKLK EFGGLEETDE LYDYANRPRR
SILETILEFH QNLKIPIEYV FDLFPTINPR YFSIASRPSS TSVELVVAIV EYKTIIRRIR
RGLCSRWLKS LTLGDKLLFS VQKMDMVFSL PGLEKPPIIM VAPGTGIAPM KSLIEYVTSS
DKDQELYLFY GCRYKEKDYL FPKLWDSLSK SNKLNIFPCF SRDEGSKIHY VQDMLFHKSS
LVGDLILNRN AIVFVCGSSG KMPKQVKLTF SEILHKQGNL KENDVQQYLL DMENQCRYKE
DVW
|
|---|
| |