Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55314 |
Symbol | |
ID | 4837290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1752790 |
End bp | 1753278 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388605 |
Product | predicted protein |
Protein accession | XP_001383105 |
Protein GI | 150864333 |
COG category | [R] General function prediction only |
COG ID | [COG1832] Predicted CoA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATGA AGTCCAAAAT CAGAGCCTTT TTTGGCCCTA CCAGACAATA TGCTGTGGCT GGAGCCAGTA ACAATCCTAC GAAATTCGGA TTCAAGATCT TGAGCTGGTA TGTCTCTCAC AACTTAACGG CTATACCAAT AAACCCTAGA GAACAGGAGA TTTTGGGTCA AAATGTCATT TCTAATGTGA CTCAGATTTT GGAGTCTATT GTAGCCAAGT CAGATTTGAA CGGTTATAAG TTGCTGGACG TGGATGGATT GAGCATCTCT TTCTTGACTC CTCCTCATAT CACAACAACT ACCTTAAAGC AGATAGCTGA TGTAGAGGGT TACGAAAACA TCGTCAAGGG ATTATGGTTT CAACCTGGAA GCTACGACCA GGAAGTGTTG GATACAGCTG AAAAGATCGG CTTGTTCAGC AAGGTAGTCT ACGAAGACGA ATGTATATTG GTCAGAGGAG AAGAAGGTTT GCACAGTGCT AATTTGTAG
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Protein sequence | MSMKSKIRAF FGPTRQYAVA GASNNPTKFG FKILSWYVSH NLTAIPINPR EQEILGQNVI SNVTQILESI VAKSDLNGYK LSDVDGLSIS FLTPPHITTT TLKQIADVEG YENIVKGLWF QPGSYDQEVL DTAEKIGLFS KVVYEDECIL VRGEEGLHSA NL
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