Gene PICST_55314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55314 
Symbol 
ID4837290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1752790 
End bp1753278 
Gene Length489 bp 
Protein Length162 aa 
Translation table12 
GC content42% 
IMG OID640388605 
Productpredicted protein 
Protein accessionXP_001383105 
Protein GI150864333 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGA AGTCCAAAAT CAGAGCCTTT TTTGGCCCTA CCAGACAATA TGCTGTGGCT 
GGAGCCAGTA ACAATCCTAC GAAATTCGGA TTCAAGATCT TGAGCTGGTA TGTCTCTCAC
AACTTAACGG CTATACCAAT AAACCCTAGA GAACAGGAGA TTTTGGGTCA AAATGTCATT
TCTAATGTGA CTCAGATTTT GGAGTCTATT GTAGCCAAGT CAGATTTGAA CGGTTATAAG
TTGCTGGACG TGGATGGATT GAGCATCTCT TTCTTGACTC CTCCTCATAT CACAACAACT
ACCTTAAAGC AGATAGCTGA TGTAGAGGGT TACGAAAACA TCGTCAAGGG ATTATGGTTT
CAACCTGGAA GCTACGACCA GGAAGTGTTG GATACAGCTG AAAAGATCGG CTTGTTCAGC
AAGGTAGTCT ACGAAGACGA ATGTATATTG GTCAGAGGAG AAGAAGGTTT GCACAGTGCT
AATTTGTAG
 
Protein sequence
MSMKSKIRAF FGPTRQYAVA GASNNPTKFG FKILSWYVSH NLTAIPINPR EQEILGQNVI 
SNVTQILESI VAKSDLNGYK LSDVDGLSIS FLTPPHITTT TLKQIADVEG YENIVKGLWF
QPGSYDQEVL DTAEKIGLFS KVVYEDECIL VRGEEGLHSA NL