| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55301 |
|---|
| Symbol | MSF1 |
|---|
| ID | 4837164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 51739 |
|---|
| End bp | 53010 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388479 |
|---|
| Product | phenylalanyl-tRNA synthetase alpha subunit, mitochondrial |
|---|
| Protein accession | XP_001382237 |
|---|
| Protein GI | 150863683 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00469] phenylalanyl-tRNA synthetase, mitochondrial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.988049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GAAATCGAGC TTGACGGAAA GATATTCAAA ACCGATGAAT GGACAAATAT TCCTCCTTTT
ATTTTGGAGC TCACGAAAAG AAAGTTGCAT CAGAACCCTG ACCATCCCAT TGGGATTTTG
CGTAGTTTGA TAGAAAAAAA CATGAAAGAT ATGGGTTATA CCTTCTACAA TAACTTCAAG
CCTGCTGTTA CAACCTACCA GAACTTCGAT GTTTTAGGAT TTCCAGAAGA CCATCCTGGA
AGATCCAAGT CTGATACCTA CTACTTAAAC AAGGATAACC TTTTAAGAAC GCATACTTCC
GCTCATGAAC TTGAATGTTT CCAAACATGC GAGACCCCTG GTTATTTGAT TACGGCAGAT
GTCTACAGAA AGGACGAAAT TGACAAAACT CACTATCCAG CTTTTCATCA ATTGGAAGGC
GCCAGAATAT GGTCTAAGGA TACGCCGAAC TTAGAGGAAC AGATAATGAA GGATATTGAA
TCTATTCCCA AGACAAATAT CATTGTAGAG GATCCATTCA GACAACATCC AATTAATGAA
AATAACCCTA AACAGGACTA CATGTCAGAT AGACAAGTGG AATTGATCAG TGTGCATCTC
AAAAAGCTGA TCGAATACTT GGTGAACCAA GTTTTTGAGA CTGCCAGAGA ATCTGCTCGA
AAGGCTGGCT CTACCGAGCC TTATTTAAAT GAACCTTTAA AGGTAAGGTG GGTCGAGGCT
TACTTTCCAT GGACTTCTCC TTCGTGGGAA ATTGAAGTCT GGTGGAAAGG TGAGTGGTTG
GAATGCTGTG GCTGTGGTAT AGTTCAACAG CAAGTTTTGT TGAACGCTGG ACTTGGTGAT
GACAAGTTGG GATGGGCGTT TGGTATTGGT ATTGATAGAA TTGCCATGTT GTTATTCGGC
ATCCCAGATA TTAGACTATT CTGGTCGTTG GATGAAAGAT TCCACAACCA GTTCAATAAC
GGACAAATCG CTACCTTTGC CCCATACTCC AAATACCCTG GAATCAAGAG AGATGTTTCA
TTCTGGTTGC CAACTGACTC ATTGCTTCAC GAAAATGATG TCATGGAAAT TGTTAGAACA
TACGCTGGTG ATGTTGCAGA AAGTGTAGCA AATATTGACG AATTTGTCCA TCCAAAAACT
GGAAAGAAGT CTCAATGTTA CCGTATTAAC TACCAATCTA TGGACAGAAA CCTCACCAAT
GAGGAGATCA ACGAAGTCCA TCAGAAGGTG GAGCTGGACT TGAAGAAGTA CTTCGGGGTT
GAAATTCGTT AA
|
|---|
| Protein sequence | EIELDGKIFK TDEWTNIPPF ILELTKRKLH QNPDHPIGIL RSLIEKNMKD MGYTFYNNFK
PAVTTYQNFD VLGFPEDHPG RSKSDTYYLN KDNLLRTHTS AHELECFQTC ETPGYLITAD
VYRKDEIDKT HYPAFHQLEG ARIWSKDTPN LEEQIMKDIE SIPKTNIIVE DPFRQHPINE
NNPKQDYMSD RQVELISVHL KKSIEYLVNQ VFETARESAR KAGSTEPYLN EPLKVRWVEA
YFPWTSPSWE IEVWWKGEWL ECCGCGIVQQ QVLLNAGLGD DKLGWAFGIG IDRIAMLLFG
IPDIRLFWSL DERFHNQFNN GQIATFAPYS KYPGIKRDVS FWLPTDSLLH ENDVMEIVRT
YAGDVAESVA NIDEFVHPKT GKKSQCYRIN YQSMDRNLTN EEINEVHQKV ESDLKKYFGV
EIR
|
|---|
| |