Gene PICST_55202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55202 
SymbolFRE2.1 
ID4837079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1824277 
End bp1826511 
Gene Length2235 bp 
Protein Length744 aa 
Translation table12 
GC content41% 
IMG OID640388394 
ProductFerric reductase, NADH/NADPH oxidase transmembrane component (8 domains) 
Protein accessionXP_001382575 
Protein GI150863926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.171681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGGTGCTAG ACTACTTCCA CTATCCCATT GGAAAGTCCA AGAATTACAA GAATCTCCGG 
AAGATGACAA CTGCCAGATA CGGACAGATC ACAACCTTCA TACTTATAGC CTTTCTAATA
CTCATCCCCA TCCACCGTTA TCTCATCAAA AACGGCTACA CTCTCACCAA CAAGCTCCAG
ATCTTGCGTA GCGTCAACAG AAGGCTCAAC AAGTACATTT ATCCCAGCGA CGACTTGCAC
GAATCACATC GCCAGTACTA CAAGAGGCTT CGTTCTAGGC TTGCACTTAG AGCTAAAACC
TGGATCTTCA ATTTTTCATA TCATGCCAGC ACCATTTTCC AGTTAGCATT TTGGCTCACA
GTTTTGTCGT CTTTGTCGCT AACAGATATT CATAATGGAG ATTTGCTCTT TCTAGCAGCC
CGTCTCGGAC GCGTTGCTGC TGTCTGTTTG CCTACTATTC TATTCTTAAC ATTAAGACCT
TCTCCTCTCC CTAACACCCT CTACTTGACA TTGATTCCCA TCCACAAATG GTTGTCGAGA
ATGGTGATAT TGCAACTGGT GCTACATGTT TCTATCTACT GTGGCTACTT CCATAAGAAC
GGCACCTGGA AAAAAGCTCT TAAAACAGAA AACATCTATG GGTGGGTAGC CGTCTTTGGA
TTCTTAGTAA TGATTATAAC TTCAGTTCTG AAAATCAGAA CAGTTTGTTT CAAGCTTTTC
TACATCAGTC ACTACTTCTG GTCGTGGGTA ATTGTCATTT GTCTCCAGTT TCACGTGAGA
CCAGTGCCTT TCACGAAGTA CACAGCCATA AACGTTGCTA TTTTGCTTTA CCAGATAGTG
TACCGCTTGC GTTGTACGAT CAAGTCCAAA ACCATGGAGA GTATAAAAGT CAATGATGTT
TCACCCAACT TGGCTTTGGT GGAATTCCCA AATGATTTGA TAATGAACCC CGCCAGAAAA
CCTGCTGCCC ATATCAGACT CACTGACTGC CACCCCAATA TATTGATTAG AATATGGAAA
CAAATTATTC CAAACTATCA TCCATACACT TTGGTCTCGT TACCTACAGA TAACTACCAG
AGATTGATTA TTAGAAAAAG TAACTTCGAA TTCACAAACG GTAAAAAGTA CTTAATCTAC
GGAAGTTTTG ATCCACACTT GCTATTTATT GGCTCCAAGA CTTCCTCATT TTCTTCGCCT
GCTTCTTCAA AGTTTTCCAT ATCAAAACTT TCTATAGATG CCAAAAGAGT CCTCATTGTA
ATCGGAGGCT CTGCTATTTC ATTTGCATTG CCGATCCTAC GTGTAATGAA CTACCATGGT
ATTCCCGTAA AGATCGTCTG GGTGCTCAAG GATTACCGCG ACATATCCAT CTTAAAATAC
TTTGACGGAT TTATCCACGG TGACGACTTT GAGATCTTTG TCACAGGAAC CAGTGAAATC
AAAGAAGAAA AGCTCTTGAG AAACAGCATT AGCTACGGAT CTATTTTGAG TCGTAAAAGC
ATTATATCCA CTTCTACTAG ACACTACTCA GAGTACGATC TAGAAAGAAA TGAAGGGAGC
CCTCTACTTG ACAAAGACGA ACTTGAAAAT ACAGCTCAAT TCAATAGCTT GCATTTTGAA
AACCAGATTG AGAACGTCGA GGTCTCTATG GATAACGAAG AAGAAGAAAC GGACGACGAA
GACTGCGCCA TAGATGAGTA CTCACACCGT AATTCCCAGC TTTTCGGATT GGAAGAAGAC
ATCAACGAAG AAGTAGGAAC TAATGTAGAA CCAGAAGATA TAAGAGTGCA AGAATACTCT
CCTGATGAAT TGACACCTAG AGAACTACAG ATACCTTCAC CAGCTCATTC TCGTAAATCC
AGCATTAACG AACCGTTCAT TCCCACATAT AACCCAAACT CTACAGAGGC TGAGGTTGCT
ATGAAGAGTT TCAGAGAAAC TCTCAAAAGA CTAAACATAG AAAACAAAGT CTACAGGGGT
AGACCCAAGC TAAATTACAA GTACTACAAC TGGTGTATCA ACGAAGGTTT TACCCAATGC
TCTGGTCCAG TAGAAGACAG CGACCATAAT TTGGTATGTT GCCGTGATTT GCCCAAAAAT
AGGGTCAGAC AAGAAGATAT AAACGCAGAG AAAATCTGGG TATTATCAGC TGGACCCAAA
CCTCTTGTCG ATAACGTTAA GTTATGGGCC AACGAGTATG GGTTGAAGTT CCACGAGGAA
GCCTTCTATG CCTAG
 
Protein sequence
SVLDYFHYPI GKSKNYKNLR KMTTARYGQI TTFILIAFLI LIPIHRYLIK NGYTLTNKLQ 
ILRSVNRRLN KYIYPSDDLH ESHRQYYKRL RSRLALRAKT WIFNFSYHAS TIFQLAFWLT
VLSSLSLTDI HNGDLLFLAA RLGRVAAVCL PTILFLTLRP SPLPNTLYLT LIPIHKWLSR
MVILQSVLHV SIYCGYFHKN GTWKKALKTE NIYGWVAVFG FLVMIITSVS KIRTVCFKLF
YISHYFWSWV IVICLQFHVR PVPFTKYTAI NVAILLYQIV YRLRCTIKSK TMESIKVNDV
SPNLALVEFP NDLIMNPARK PAAHIRLTDC HPNILIRIWK QIIPNYHPYT LVSLPTDNYQ
RLIIRKSNFE FTNGKKYLIY GSFDPHLLFI GSKTSSFSSP ASSKFSISKL SIDAKRVLIV
IGGSAISFAL PILRVMNYHG IPVKIVWVLK DYRDISILKY FDGFIHGDDF EIFVTGTSEI
KEEKLLRNSI SYGSILSRKS IISTSTRHYS EYDLERNEGS PLLDKDELEN TAQFNSLHFE
NQIENVEVSM DNEEEETDDE DCAIDEYSHR NSQLFGLEED INEEVGTNVE PEDIRVQEYS
PDELTPRELQ IPSPAHSRKS SINEPFIPTY NPNSTEAEVA MKSFRETLKR LNIENKVYRG
RPKLNYKYYN WCINEGFTQC SGPVEDSDHN LVCCRDLPKN RVRQEDINAE KIWVLSAGPK
PLVDNVKLWA NEYGLKFHEE AFYA