| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55136 |
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| Symbol | |
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| ID | 4837161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1593689 |
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| End bp | 1594588 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640388476 |
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| Product | predicted protein |
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| Protein accession | XP_001382529 |
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| Protein GI | 150863895 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0190714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAA ACAACTACGA CAACGACTCC GTAACATACT CTCCTACCGG CAGGTTGTTC
CAGGTAGAAT ATGCCTTAGA GGCAATTAAA CAGGGTAGTG CAGCTGTGGG ACTCTCGTCG
AAGAACCATG TTGTGTTGGT GGCATTGAAG CGTAATGCGG AGGAATTGGG TTCCTACCAG
AAGAAGATCA TCAAGGTGGA TACCCATATG GGAATTGCAT TGGCTGGTTT GGCCCCTGAT
GCAAGAGTAT TATCGAACTA CTTGAGAAAG CAGGCCATGT CTTCTAGAAT GATTTTCAAC
AGACCATTGC TGACTTCGAA AGCTGTTTTG TCAATTGCTG ATAAGGCCCA GGAGAACACC
CAGTCGTACG GATCTAGACC GTACGGAGTG GGGTTGTTGG TTTCAGGCTA CGACGAGACC
GGGGCACATC TTTATGAGTT CCAACCTTCT GGATCTGTGT TGGAATACTA TGGAGCTGCC
ATTGGGGCAA GATCTCAAGC AGCCAGAACA TATTTGGAAA GAAATTTGGA CACCATCCGC
GAAAGCGACA CCGTAGAGCT GTTGATTGTA CACGGATTGA ACGCATTGAG AGACACTTTG
TCGCAAGATG TGGAATTGAC ATTCAAGAAT ACATCTGTGA GTGTAGTCGG TAAGGACATA
GACTTCACCA TATATGATGA TGAAGACGTC CAACAATGGT TGGACAAGTT GGACTCGGTG
TCGAATGCAA GAAACAGAGA AGAGGACGAC GGAGCCGATG AAGAGGTTGC CGAAGAAACC
GCTGCTACCG ATGAAGCTGT AACATCCACT ACTGGTACTG GTGCAGCTTC TACCGACGCT
GCTTCTGGAA ACGATGCACC TGCTCCATCG ACAGACGACA GAATGGAAAC TGACGAATAA
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| Protein sequence | MFRNNYDNDS VTYSPTGRLF QVEYALEAIK QGSAAVGLSS KNHVVLVALK RNAEELGSYQ
KKIIKVDTHM GIALAGLAPD ARVLSNYLRK QAMSSRMIFN RPLSTSKAVL SIADKAQENT
QSYGSRPYGV GLLVSGYDET GAHLYEFQPS GSVLEYYGAA IGARSQAART YLERNLDTIR
ESDTVESLIV HGLNALRDTL SQDVELTFKN TSVSVVGKDI DFTIYDDEDV QQWLDKLDSV
SNARNREEDD GADEEVAEET AATDEAVTST TGTGAASTDA ASGNDAPAPS TDDRMETDE
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