Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55076 |
Symbol | |
ID | 4837192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1920021 |
End bp | 1921556 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388507 |
Product | predicted protein |
Protein accession | XP_001382596 |
Protein GI | 150863942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAC CCTCTCTCAA CTTCCATATC CAATCGCATC TGACACAGTT CCGGATCCCT ACCGAGCTAA TCAAGAAGAA CTTCAAGACA ATCCAGAAAC TTGTAGAGAA ACAGAAAAAG CAGATGACCG ACGATGTTGC CAAAATTAAG AAAAATCCAA ATATCCCCAC AGCCATGAAG TTGGCCATGG TTCGTAAGAG TATCAAGAGC TTTGAGGGAT TCCAGAAGAA GTTGCAAGCT TCTATTGCCA AGGACGAAGA ATTGCGCTCC AGGCTTATTG CCAGGATAGA GCATTTGGCA CTCATCAGCG AATACTGCAT CACTCAGGAT AAAACCAAGA CTCAAGTGGA AAAGCCATCA CAGCCACAGA GCCAGAATGA AGATACAGAA GAGAAAGAAC ACTCCACAAA AGACGACAAC GACAAGTACT TGGATTTGCA TAACCCGAAT CTCATCACAT GGTATCGAGA CCAGACGAAC TTGCTCATTA TCGACTATCT TATCAAGTCC AATACGAGAA CAGATCACAA TATAGGCTTG CTACTCTTGA AGAGTCTCTC TGAATCAAAC CCAAAGTACA TGAAGTTGAT CGACTACGAC TTGTTTGAGA GCTTCAACAA AGTTTATGTT TCCATCATGG AAGACCACGA TCTCACATTA GTGATAGCGT GGTTCAACGA AAACAGAAAC TTTTTGAAGA AAGCAAACTC CAATCTCGAG TTTGAAATAA ACTATTGTAG GTTCCTTTCT CTTATAGAAA AAGGAGATGT AAATGAAGCT ATCAAGTTCT CCAGTATTAA TCTCTCACCA TATGGAAATG TTAGTAATTA TCAAGATACC GATCGAGCCA ATCACGAACA CAACTTGAAT CGCCTAAAGG AAATAGGTGG CTTGTTGGTG TATATGGCGA TAAACGAAGA GAAGAGAACC AGAAATGACA AGATAGCTTT CTCCAGCAAT TTGCTCATAA ACTCTCCTCG GTTCCATGAA TACGAGAAGC TTCTTTCTGA CGAAAGATGG GACAGTTTGT CGATGTGTTT TGTAGAGAAC TTCACGAAAT TGTATGGTAT TTCCAAGAAC TATCCTATCT TCATCTACTT GTCTGCTGGT CTAGCAAGTT TGAAGACAAA GTCATGTTAT CACAATACGG AAAACACCAT CTTCAGGGAA AACCAGGAAA TAAATGTCAC CGATGAAAGC ATATACAAGA AGGACCTAAC AGTATTAACC GACAAGAAAT ACAGAGGTTC CAATCAGTAC TACAAACTCT TGAACAAGAT CAATAACTGC CCGGTGTGTT CACCTGAGTT GTACAAGTTG AGTAGAAACT TGCCGTACGC TCAGTTGATC ACCAGTATTT TCAATAATCC TTTCAAACTA CCTAATGGTA ATATCTATCC ATTTGACAAG TTGCTCAACC CGTCCGAGAA GTATTTGTCA GAAAAGAATA CTTTGTTGCG TATGGGCAAA ATCAAGGATC CTTTAACCAG AGAGATTTTC TTGATAGACA CTTGCATAAG AGTGTATCCA GCCTAG
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Protein sequence | MSEPSLNFHI QSHSTQFRIP TELIKKNFKT IQKLVEKQKK QMTDDVAKIK KNPNIPTAMK LAMVRKSIKS FEGFQKKLQA SIAKDEELRS RLIARIEHLA LISEYCITQD KTKTQVEKPS QPQSQNEDTE EKEHSTKDDN DKYLDLHNPN LITWYRDQTN LLIIDYLIKS NTRTDHNIGL LLLKSLSESN PKYMKLIDYD LFESFNKVYV SIMEDHDLTL VIAWFNENRN FLKKANSNLE FEINYCRFLS LIEKGDVNEA IKFSSINLSP YGNVSNYQDT DRANHEHNLN RLKEIGGLLV YMAINEEKRT RNDKIAFSSN LLINSPRFHE YEKLLSDERW DSLSMCFVEN FTKLYGISKN YPIFIYLSAG LASLKTKSCY HNTENTIFRE NQEINVTDES IYKKDLTVLT DKKYRGSNQY YKLLNKINNC PVCSPELYKL SRNLPYAQLI TSIFNNPFKL PNGNIYPFDK LLNPSEKYLS EKNTLLRMGK IKDPLTREIF LIDTCIRVYP A
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