Gene PICST_55076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55076 
Symbol 
ID4837192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1920021 
End bp1921556 
Gene Length1536 bp 
Protein Length511 aa 
Translation table12 
GC content40% 
IMG OID640388507 
Productpredicted protein 
Protein accessionXP_001382596 
Protein GI150863942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC CCTCTCTCAA CTTCCATATC CAATCGCATC TGACACAGTT CCGGATCCCT 
ACCGAGCTAA TCAAGAAGAA CTTCAAGACA ATCCAGAAAC TTGTAGAGAA ACAGAAAAAG
CAGATGACCG ACGATGTTGC CAAAATTAAG AAAAATCCAA ATATCCCCAC AGCCATGAAG
TTGGCCATGG TTCGTAAGAG TATCAAGAGC TTTGAGGGAT TCCAGAAGAA GTTGCAAGCT
TCTATTGCCA AGGACGAAGA ATTGCGCTCC AGGCTTATTG CCAGGATAGA GCATTTGGCA
CTCATCAGCG AATACTGCAT CACTCAGGAT AAAACCAAGA CTCAAGTGGA AAAGCCATCA
CAGCCACAGA GCCAGAATGA AGATACAGAA GAGAAAGAAC ACTCCACAAA AGACGACAAC
GACAAGTACT TGGATTTGCA TAACCCGAAT CTCATCACAT GGTATCGAGA CCAGACGAAC
TTGCTCATTA TCGACTATCT TATCAAGTCC AATACGAGAA CAGATCACAA TATAGGCTTG
CTACTCTTGA AGAGTCTCTC TGAATCAAAC CCAAAGTACA TGAAGTTGAT CGACTACGAC
TTGTTTGAGA GCTTCAACAA AGTTTATGTT TCCATCATGG AAGACCACGA TCTCACATTA
GTGATAGCGT GGTTCAACGA AAACAGAAAC TTTTTGAAGA AAGCAAACTC CAATCTCGAG
TTTGAAATAA ACTATTGTAG GTTCCTTTCT CTTATAGAAA AAGGAGATGT AAATGAAGCT
ATCAAGTTCT CCAGTATTAA TCTCTCACCA TATGGAAATG TTAGTAATTA TCAAGATACC
GATCGAGCCA ATCACGAACA CAACTTGAAT CGCCTAAAGG AAATAGGTGG CTTGTTGGTG
TATATGGCGA TAAACGAAGA GAAGAGAACC AGAAATGACA AGATAGCTTT CTCCAGCAAT
TTGCTCATAA ACTCTCCTCG GTTCCATGAA TACGAGAAGC TTCTTTCTGA CGAAAGATGG
GACAGTTTGT CGATGTGTTT TGTAGAGAAC TTCACGAAAT TGTATGGTAT TTCCAAGAAC
TATCCTATCT TCATCTACTT GTCTGCTGGT CTAGCAAGTT TGAAGACAAA GTCATGTTAT
CACAATACGG AAAACACCAT CTTCAGGGAA AACCAGGAAA TAAATGTCAC CGATGAAAGC
ATATACAAGA AGGACCTAAC AGTATTAACC GACAAGAAAT ACAGAGGTTC CAATCAGTAC
TACAAACTCT TGAACAAGAT CAATAACTGC CCGGTGTGTT CACCTGAGTT GTACAAGTTG
AGTAGAAACT TGCCGTACGC TCAGTTGATC ACCAGTATTT TCAATAATCC TTTCAAACTA
CCTAATGGTA ATATCTATCC ATTTGACAAG TTGCTCAACC CGTCCGAGAA GTATTTGTCA
GAAAAGAATA CTTTGTTGCG TATGGGCAAA ATCAAGGATC CTTTAACCAG AGAGATTTTC
TTGATAGACA CTTGCATAAG AGTGTATCCA GCCTAG
 
Protein sequence
MSEPSLNFHI QSHSTQFRIP TELIKKNFKT IQKLVEKQKK QMTDDVAKIK KNPNIPTAMK 
LAMVRKSIKS FEGFQKKLQA SIAKDEELRS RLIARIEHLA LISEYCITQD KTKTQVEKPS
QPQSQNEDTE EKEHSTKDDN DKYLDLHNPN LITWYRDQTN LLIIDYLIKS NTRTDHNIGL
LLLKSLSESN PKYMKLIDYD LFESFNKVYV SIMEDHDLTL VIAWFNENRN FLKKANSNLE
FEINYCRFLS LIEKGDVNEA IKFSSINLSP YGNVSNYQDT DRANHEHNLN RLKEIGGLLV
YMAINEEKRT RNDKIAFSSN LLINSPRFHE YEKLLSDERW DSLSMCFVEN FTKLYGISKN
YPIFIYLSAG LASLKTKSCY HNTENTIFRE NQEINVTDES IYKKDLTVLT DKKYRGSNQY
YKLLNKINNC PVCSPELYKL SRNLPYAQLI TSIFNNPFKL PNGNIYPFDK LLNPSEKYLS
EKNTLLRMGK IKDPLTREIF LIDTCIRVYP A