| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54885 |
|---|
| Symbol | MRM2 |
|---|
| ID | 4836945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 203271 |
|---|
| End bp | 204062 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388260 |
|---|
| Product | Mitochondrial rRNA Methyltransferase |
|---|
| Protein accession | XP_001382804 |
|---|
| Protein GI | 150864104 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.257142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATATAG CCGTATCTCG ATGTCTTCGT TCAGAGACTC AGGGAGACAT TGTAAATTTT
ATCAGATATA AGTCCAAGTC TTCGACTCGA TGGCTCAACA GACAAGTCAA CGATCCCCAT
ACTAAGCAGT CGAAATCAGA TCATTATCGA TCTCGAGCTG CCTATAAATT GATAGAGATA
GACCAGAAGT ACAGCGTTTT CAACAGAAAG ACAGAAAACA TTTTAGATCT CGGCTTTGCC
CCTGGTGCAT GGACTCAAGT GGCAGTGGAA CGAATGAAAA AACTAGGAGT AAAGTCTCTG
ATTCTAGGCG TAGATCTTAT ATTATCCACA GCTCCGAAAG GGAGCCATTT TATTCAGGGT
AATATACTTT CAAAAAAGAC CCACGATGAT ATTCGGGATT TTTTTACTCG AAAACAGCTG
GAAATAGTGA AAGAAAGTGA GGGTTCAGAG ATAGAAATAA TAGATCAAAA ACGTAAAATG
TTGACTGTAG ACTTAGTTCT CAGTGATATG ATGTCCAACA CCTCCGGAAT AAAGGATAAT
GACCATTATG CAAGTATGGA TCTCTGTGAT GGGGCTATAA TACTAGCGTG CGAAGTTCTT
AAAGAAGGTG GAAGCTTGGT GATGAAGTTC TACACTGGCA AGGAAGACCA GGTATTACAA
GAGAGAATGC GTTTACTATT CGAGAAAGTC TACAGATTCA AGCCTCAGGC TTGTCGGAAC
GAGCTGAGAG AAATGTACAT TATAGGAGTT GGCAAGAAGC GAGATATCTG CGTAGAAGAA
GTTTTCCACT AG
|
|---|
| Protein sequence | MYIAVSRCLR SETQGDIVNF IRYKSKSSTR WLNRQVNDPH TKQSKSDHYR SRAAYKLIEI
DQKYSVFNRK TENILDLGFA PGAWTQVAVE RMKKLGVKSS ILGVDLILST APKGSHFIQG
NILSKKTHDD IRDFFTRKQS EIVKESEGSE IEIIDQKRKM LTVDLVLSDM MSNTSGIKDN
DHYASMDLCD GAIILACEVL KEGGSLVMKF YTGKEDQVLQ ERMRLLFEKV YRFKPQACRN
ESREMYIIGV GKKRDICVEE VFH
|
|---|
| |