Gene PICST_54814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_54814 
Symbol 
ID4837218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp669189 
End bp669983 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content45% 
IMG OID640388533 
Productpredicted protein 
Protein accessionXP_001382891 
Protein GI150864173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0221586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACATC ACGGAAAGCC TCCTCCGCCA CATTTGAACC CTGCTCGTCT CAAGACAGCT 
TTGAAAATGG CGATATCCAA GCTGAAGTTC ATCCAGGAAA AGAAACTGGC TCTCACCAAG
CAACAGCGTA GACAGTTAGC AGACTTGTTG AAGGTTGGAA AGGAACTGAG TGCCACAATT
AGAGTGGAGA ACATTATCCG GGATGATATT TATATTGAAT TGCTTGAGCT TATCGAATTG
TATTGTGAAT TGCTCTTGGC TAGAATCTCC ATCATCTTGG ATCCTGCTAG AACTACCTGC
GATGCCAGTC TTATAGAAGC TGTACAATCT CTTATCTATG CTGCGCCACA TACTGAACTC
AACGAGTTGA CTTCCATTCG TGAGATATTG GTCTACAAAT ACGGACCTGA TTTCGGACGT
GCAGCAAAAG AGAACACCGA CAATTTTGTC CCAGCCAAGA TCGTCACCAG ATGTCAAGTT
GAGCCCCCAC CAGAGAAGTT GGTCACTTTG TACTTGTGTG AAATAGCGAA AGCATACGAA
GCTCCGTATT CGAAGTTGCA GGAATATTTG GACGAACTAG CCGTCGAAGA AAAGGATGAT
AAAGATGATG ATGATAATGA TGAAGGAGGT AGTGGTGGAA TCAAGGTCCC TAATGAGCCT
ATAGCCGAAA CTACCGATGA ACCAGGAATC ACAAAGCCAG CTGGTGCCAA ACCTGTTTCT
GCCGCAAAGA AGCAGCAAAG TGAGTTCGAT GATCTCAAGG CTCGTTTTGC TGCCTTGAAA
GGCGTAGGTC CATAG
 
Protein sequence
MSHHGKPPPP HLNPARLKTA LKMAISKSKF IQEKKSALTK QQRRQLADLL KVGKESSATI 
RVENIIRDDI YIELLELIEL YCELLLARIS IILDPARTTC DASLIEAVQS LIYAAPHTEL
NELTSIREIL VYKYGPDFGR AAKENTDNFV PAKIVTRCQV EPPPEKLVTL YLCEIAKAYE
APYSKLQEYL DELAVEEKDD KDDDDNDEGG SGGIKVPNEP IAETTDEPGI TKPAGAKPVS
AAKKQQSEFD DLKARFAALK GVGP