Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_54814 |
Symbol | |
ID | 4837218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 669189 |
End bp | 669983 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388533 |
Product | predicted protein |
Protein accession | XP_001382891 |
Protein GI | 150864173 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0221586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACATC ACGGAAAGCC TCCTCCGCCA CATTTGAACC CTGCTCGTCT CAAGACAGCT TTGAAAATGG CGATATCCAA GCTGAAGTTC ATCCAGGAAA AGAAACTGGC TCTCACCAAG CAACAGCGTA GACAGTTAGC AGACTTGTTG AAGGTTGGAA AGGAACTGAG TGCCACAATT AGAGTGGAGA ACATTATCCG GGATGATATT TATATTGAAT TGCTTGAGCT TATCGAATTG TATTGTGAAT TGCTCTTGGC TAGAATCTCC ATCATCTTGG ATCCTGCTAG AACTACCTGC GATGCCAGTC TTATAGAAGC TGTACAATCT CTTATCTATG CTGCGCCACA TACTGAACTC AACGAGTTGA CTTCCATTCG TGAGATATTG GTCTACAAAT ACGGACCTGA TTTCGGACGT GCAGCAAAAG AGAACACCGA CAATTTTGTC CCAGCCAAGA TCGTCACCAG ATGTCAAGTT GAGCCCCCAC CAGAGAAGTT GGTCACTTTG TACTTGTGTG AAATAGCGAA AGCATACGAA GCTCCGTATT CGAAGTTGCA GGAATATTTG GACGAACTAG CCGTCGAAGA AAAGGATGAT AAAGATGATG ATGATAATGA TGAAGGAGGT AGTGGTGGAA TCAAGGTCCC TAATGAGCCT ATAGCCGAAA CTACCGATGA ACCAGGAATC ACAAAGCCAG CTGGTGCCAA ACCTGTTTCT GCCGCAAAGA AGCAGCAAAG TGAGTTCGAT GATCTCAAGG CTCGTTTTGC TGCCTTGAAA GGCGTAGGTC CATAG
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Protein sequence | MSHHGKPPPP HLNPARLKTA LKMAISKSKF IQEKKSALTK QQRRQLADLL KVGKESSATI RVENIIRDDI YIELLELIEL YCELLLARIS IILDPARTTC DASLIEAVQS LIYAAPHTEL NELTSIREIL VYKYGPDFGR AAKENTDNFV PAKIVTRCQV EPPPEKLVTL YLCEIAKAYE APYSKLQEYL DELAVEEKDD KDDDDNDEGG SGGIKVPNEP IAETTDEPGI TKPAGAKPVS AAKKQQSEFD DLKARFAALK GVGP
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