Gene PICST_54746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_54746 
SymbolSEH2 
ID4836743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp351462 
End bp352427 
Gene Length966 bp 
Protein Length321 aa 
Translation table12 
GC content44% 
IMG OID640388058 
Productsoluble epoxide hydrolase 
Protein accessionXP_001382299 
Protein GI150863732 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA GATTCGTAAT CAAGCTTACC CATGGTTCCA GAAGTTTCAC CACCTTCTCG 
AACTACAGCG AACAAGATGT TTTCAATGGT GCCGGAACCA AGTGGACAAG AGTGATCTTT
CTCTTGCACG GGTTTCCTGA TGAGAATTCG TCCTATGATG GAGCCTGGCC GCATTTAGCA
CAAGGCTTTC CTAATGAAAA GGGTCTTTTG TTGCTAGCAC CATTATTGAG AGGCTACGAA
GAGCTGAGTT TGGGGCCAGA CGAATATAGT GCTCATGATG TTGCTGGTGA CGTCGGCGCC
TGGATCAAGC AGATTAACCC CAGCAACAAG GTTCCAGTTC ACATTTTGGG CCACGATTGG
GGTGCTCTAA CAGCGTTCAA AACTGCTTCG AGGTTTCCAG AGTTGGTGAC TTCAATTGTC
ACTTTGGGAA TTCCTTATTT GACCAATGTG TTTCCCTGGA AGTTGGCTTG GAATCTTCCC
GAACAGTTAT ACTATTGGTC GTATATGTTG ACGATGCAGT TATCGTTGTT GTACAGATCC
AGATTCGAAC AAACGGGCAG AGATTCGTAC TTAGATTCGC TCTGGAAGTA CTGGTCTCCT
ACCTGGAAGT ATACCGAGGA AGATATTAGT AATATAAGAG CCAGATTGAG TGATCACAGA
ATCATGGATG CTACCACAGC CTATTACAGA GCCATCTTCA ACCCGATCAA CCTTATTAAC
GGCAAGTCTA AATGGCCAAT TGACTTCAGC CAAGTTCCCA CTTATTTTAT AGGTGGAGCC
CAAGACGGTT GTATTACAAG CAAATTGTAC GAATGGGAAA GAGAGTTGTT GAAGGATGAA
CCCAATGTCA AGACAACTAT TTTGCCTAAC CTGGGGCATT TCTTACATAG AGAAGAACCC
CAAAAAGTTG CCGAGTTAGC GATTGAGTTC TTCGAAAAAT ATTCCTCCAA GACTACGAGT
AGTTAG
 
Protein sequence
MTERFVIKLT HGSRSFTTFS NYSEQDVFNG AGTKWTRVIF LLHGFPDENS SYDGAWPHLA 
QGFPNEKGLL LLAPLLRGYE ESSLGPDEYS AHDVAGDVGA WIKQINPSNK VPVHILGHDW
GALTAFKTAS RFPELVTSIV TLGIPYLTNV FPWKLAWNLP EQLYYWSYML TMQLSLLYRS
RFEQTGRDSY LDSLWKYWSP TWKYTEEDIS NIRARLSDHR IMDATTAYYR AIFNPINLIN
GKSKWPIDFS QVPTYFIGGA QDGCITSKLY EWERELLKDE PNVKTTILPN SGHFLHREEP
QKVAELAIEF FEKYSSKTTS S