Gene PICST_54653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_54653 
Symbol 
ID4836655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2051751 
End bp2052797 
Gene Length1047 bp 
Protein Length348 aa 
Translation table12 
GC content47% 
IMG OID640387970 
Productpredicted protein 
Protein accessionXP_001382621 
Protein GI150863962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.191622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT CAGTGGATGA TATATTAAAG GGCATCTCGG CATCACTTCA GTCTACCAAG 
ACTACCGTAG ACGAGCTTGT TTCTGGTGTC CAAAACGAAG AGAGCTCATA TCCCCAAATC
ATCCAGTCAT TGTTGAGCAA GTCTTCACAG CAGAAAGTCG AGGGTATGTC CCTTTTGGCA
CTCAAGAATA ATTCCTTGGT GTCCTACTTG AACAACCTTG CCTTGATAGT GTTGGCCCAG
TTGGAGAGAT TAGAATCTCA CGATATCAGC GACATTGAAA AGATTAGAGA AGATATCATT
AAGCGTACCA TAGTCCAGAG AGTGACCTTG GAGAAAGGTG TTAAGCCTTT GGAAAAGAAG
TTGACATACC AGTTAGACAA AATGGTGAGG TCGTACACGA GAATGGAAGC TGACGAAACC
AAGTTGGAAG AGAAGTTGAA GAGCAAACAG GAAAATGGCC AGGAAGGTGA AGTGAGCGAC
GGATCAGACT CTTCAGAAGA CGAAGATGCC TTATCTTACA GGCCCGATGC CGCGGCCTTG
GCCAAGATGG CACCCAAGAG TTCTAGAAGC AAGCCCAAGT CTCGTGACGG GGACGAAGAG
TCGAACGAAA AGTATAAACC TCCCAAGATC TCTGCCGTTG CACCACCCAC AGCTCCACAG
CGTGATCCAG ATGCCAAAGA AAAAGAAGAC AAGAACAGAA AATTACAGAG TATGGAAGAA
TACTTGCGCG AGCAGTCTGA CTTGCCTCTG GTGGAGTCAT CGATTGGTTC TACTATTGTA
GACCATGGTA GAGGAGGTGT CAAGACCCAG CATGACAAGC AGAAGGAACA GGAAGTCCAG
AGATACGAAG AAAGCAACTT TGTCAGATTG CCCCAGAACC AGACCAAGAA GTCGTTCAAG
CAGAGACGGA GAGACATGGC CAACACCTTT GGTGGGGAGG ACTGGTCTAT GTTCAGTGAG
ACTAACTCCC GTAATGTCAG CAGTGGTACT TCTAGAAAGA GAAAGGCGGG CAGTGTGTGG
GACAAAGTGA AGAAGAGACA AGGTTAA
 
Protein sequence
MSESVDDILK GISASLQSTK TTVDELVSGV QNEESSYPQI IQSLLSKSSQ QKVEGMSLLA 
LKNNSLVSYL NNLALIVLAQ LERLESHDIS DIEKIREDII KRTIVQRVTL EKGVKPLEKK
LTYQLDKMVR SYTRMEADET KLEEKLKSKQ ENGQEGEVSD GSDSSEDEDA LSYRPDAAAL
AKMAPKSSRS KPKSRDGDEE SNEKYKPPKI SAVAPPTAPQ RDPDAKEKED KNRKLQSMEE
YLREQSDLPS VESSIGSTIV DHGRGGVKTQ HDKQKEQEVQ RYEESNFVRL PQNQTKKSFK
QRRRDMANTF GGEDWSMFSE TNSRNVSSGT SRKRKAGSVW DKVKKRQG