| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54648 |
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| Symbol | AYR1 |
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| ID | 4836944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1578934 |
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| End bp | 1579827 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388259 |
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| Product | 1-Acyl dihydroxyacetone phosphate reductase |
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| Protein accession | XP_001383079 |
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| Protein GI | 150864313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.329924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCCG TAACACCACA GAGACAAAAG ATTGCACTCG TCACCGGGGC CTCGTCAGGA
ATCGGATATG TAACCTGCCT TGAGTTTGCC AAAAGAGGAT ATAAGGTATT CGCTGGTGCC
AGAAGATTGG AGCCCATGGA GCCATTACGT GAACACGGCG TTATTCCCTT CAGCTTGGAT
GTGTCGTCGT TGGAAAGTGT CAAGAAAGTC AAGCAGTTTA TCATTGAACA AACCGGAGAT
CACTACCTCG ACATACTTTT CAACAATGCT GGCCAATTGT GTACTCTTCC GGCAATAGAT
GTGACCGATG AATGGTTCAC GCAGTGTTTT GAAGTCAACG TGTTTGGTCC CATGAGATTG
ACTCGTGAAT TGAGCCCTTT GCTCATCAAT GCAAAGGGTG CAATTGGGTT CACTGGTTCT
TTCACTGGTG TCGTTCCAAT TCCATTTGCC TCGACCTATT GCGCCAGCAA GGCTGCTATC
CATCAATATG CTGCTACTTT AAGAATTGAA ATGAAGCCAT TCGGAGTCAA GGTTCTCAAC
TTCGTTACCG GTGGTGTTGA CACGGGCATA CTGGACGAGA GAAGCTTTCC GGCTACATCT
TTATTCAACA CTCCAGACAT GGATGCTGCC ATGAAAGAAA GAAAAGAAAT GGCCAGAAAA
AACCAGACAA TGGATCCAAA AGAGTACGCG AGACAGGTTG TCAACGACTT CGAGGCGGCC
GTGGTTGGAG GCAAGTTGCA CCTTTACAGA GGATCAATGG CTACATTCTT CGGTTTCTAC
TGTATGGCAC TTATCCCCAG AGTTTTTGTG GAAAGTCTTT TGATAAGAAG GTTCAAGTTG
GCCAATGTCT ACTCATACTT GGAGGCTAAG TACTCTAAAA CCAAACTCGA ATAG
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| Protein sequence | MSAVTPQRQK IALVTGASSG IGYVTCLEFA KRGYKVFAGA RRLEPMEPLR EHGVIPFSLD
VSSLESVKKV KQFIIEQTGD HYLDILFNNA GQLCTLPAID VTDEWFTQCF EVNVFGPMRL
TRELSPLLIN AKGAIGFTGS FTGVVPIPFA STYCASKAAI HQYAATLRIE MKPFGVKVLN
FVTGGVDTGI SDERSFPATS LFNTPDMDAA MKERKEMARK NQTMDPKEYA RQVVNDFEAA
VVGGKLHLYR GSMATFFGFY CMALIPRVFV ESLLIRRFKL ANVYSYLEAK YSKTKLE
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