| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54418 |
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| Symbol | |
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| ID | 4836885 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1941210 |
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| End bp | 1942361 |
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| Gene Length | 1152 bp |
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| Protein Length | 346 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388200 |
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| Product | predicted protein |
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| Protein accession | XP_001382601 |
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| Protein GI | 150863946 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG5333] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAG ATTTCTGGTG TTCTTCCCAG CGCAATAAAT GGCAACTCAG CCGGCAGTCG
CTTCTAGAAG CTCGAAGAAA AGTCCTTCTT CTTGAGAGGA AAATGATTCA AAACGGCCTT
ATTAAAGACT ATCCCAATAT CCACTATGAC TTTAACATGC GGATCTATTT GCACAACTTG
TTGATCAAGC TTGGCCGCCG ATTAAACATA CGACAAGTGG CTCTAGCCAC TGCCGAAATT
TATCTCAATC GGTTTCTCAC TCGTGTTCTG TTGAAGGAGA TCAATGTGTA TCTCTTGGTT
ACTACCTGTT TGTATGTAGC CTGCAAGATA GAAGAGTGCC CTCAGCATAT ACGATTGATC
ATTTCGGAAG CCCGTAACTT GTGGCCCGAA TACATACCGC ACGATGTTAC CAAACTCGCT
GAATTCGAGT TCTACTTGAT AGAAGAAATG GACCTGTATC TTTTCCTTCA TCATCCGTAC
AAGTCTTTAA TTCAAATCAG AGACTTTTTG AACGAGAACA GCGCTGTCTT TGGCTTTACA
TTAACAGACG ATGAGCTTCA GAACGCCTGG TCGCTTGTAA ACGACAGCTA TATCACCGAT
TTGCATTTGC TCTTGCCGCC TCATATAATT GCGGTGGCTC TGATCTACAT CACTATAGTG
TTGAAGAAGA ATCTATCCGC AATTCGTGTG AACAGTAGTG CGGTTAACTC CAATGGAGGT
CCAAATTCAA TGATGTTTAA CCGAAATCCG GACCAGAATT CTATGCATAT AGACGACTTG
ATGATTCTAG CCAATCCTTC AACAGTCAAT GGCAACCAGA ATGCCTCCAC TGCTTCAGGA
GTCGATAGTG GAAACACAGT AGCCGGGTCC GATCCCAATT CTGGTGGACA AAATGTAAAT
AGTAACAGCA ATGGTACAGG TTCAGACTTG GTTAACAATC TCGAAAGGAC AAACTTTCAC
GACATGAAAT TGGACGAAGA GACTATCAAG ATCAACAAGT TCATGAACTT CTTGGACCAT
TCGCACATCA ACTTGGACGA GGTGGTGGAG GCCATGCAAG ACATGATCAA CATCTACGTT
CAATGGAATC GGTACAACGA GCAGGGTGTG AAGAAGGCAT TGCAGGTGAT GCTTCTCAAT
AGACAGTTAT AA
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| Protein sequence | MSADFWCSSQ RNKWQLSRQS LLEARRKVLL LERKMIQNGL IKDYPNIHYD FNMRIYLHNL
LIKLGRRLNI RQVALATAEI YLNRFLTRVS LKEINVYLLV TTCLYVACKI EECPQHIRLI
ISEARNLWPE YIPHDVTKLA EFEFYLIEEM DSYLFLHHPY KSLIQIRDFL NENSAVFGFT
LTDDELQNAW SLVNDSYITD LHLLLPPHII AVASIYITIV LKKNLSAIRV NSSAVNSNGG
PNSMMFNRNP DQNSMHIDDL MILANPSTPG SDLVNNLERT NFHDMKLDEE TIKINKFMNF
LDHSHINLDE VVEAMQDMIN IYVQWNRYNE QGVKKALQVM LLNRQL
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