| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54240 |
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| Symbol | |
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| ID | 4837493 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2167900 |
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| End bp | 2171511 |
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| Gene Length | 3612 bp |
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| Protein Length | 1123 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388808 |
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| Product | predicted protein |
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| Protein accession | XP_001382641 |
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| Protein GI | 150863980 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.661507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0365797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTCAAAGATA TAAACGAAAT TCTCAACTTC CCTATAGAAT CGTCGCATGC CTATTCCTAC
GCCCATCTTT CGCCCAACTC GTTGGCTCTC CGTCTTAATG TGCTCAAGAG ATCATTAGAG
ATCCTTAAAG ACAGACCAGA CTTATTCAAA TGGCAATTTT TGCTGAGTGA ACCTCCTTCC
ATTCACTCCG AAAATCATTC GGGAACAAAC TCTCCACGTT TGGATCAACC TCCACCTTTG
CTTAATCTCA AAAACTTATC TAATCTGTCA CTTCATAACA ACACTGCCAA AACATCCGGT
CAAGGCATAC CTTCGGTGCA CCCGTTGTAC ACTCACGGAA ACCTCAGCAC AGAGATAATT
GACACTATTG GTAATCAAAA GTATAAAGTA CAGAATAACG CATCTTCTGC CGCATTGGCA
GCGTTTTTTA GACCTCCCCT TAAGAGATCT GATAGTCTTC CCATTACTTC TGAATCCGCA
GAAGAAATCG ACGACCTGTT GCAACTTCCA AAGGTAACAA GAGTAGTCTC GAGTTCTGCT
ACTTTTTCAC ACGACAGCAT CTTGAGAGAC GACTTGAAGG ATATAATCAC ATTGTTGGAA
AACGACCTTG ATTCGTTAGT AAGCAAAAAT TCGGAGATAG CTTCAACATT GCACGATTTA
TCCTTATCTA ATAACGATAA AGGTGATGGT ATCACGACTA AAGATAACCA TTTGCGGTAT
GAGTTTGTCA AGAACAAGTT GCTTTATGCA TTGGCTACTC CATTTGTAGA GAATTCAGCT
ATGACATCTT CTCTTTTGCA AAGCGATGGC TCGAGTTCTA CTTCCAGCAT ACCTGTCCGT
CCTTCTACTA CAGCATTGAA CATGTTAAAC AACAATTACA CCACACAGCC ACCTCCTTCC
AGTAACAGTC GTCCTTTTCA TGCCATGCCG GCGGGAAAGC ACACATTGCC TCAGTCTGTA
TTCACAGTAG AGGTAGATAC TCCCTGGTCT GTGAAAGCTG CTAACGATTT AGCCTGTCTT
ATGTTTGGTG TTCTGAAGAA TATGATCAGA GCCCTAACAT TGATGGACTT GATAGCTCCA
CAGTTCCGAG ACTTTGTCTC TGACAGATTG ACGAAGTACA TGCAAGAAGA CTTGGAGACT
TCACTCAAGA TGAAACGTAA CTCGGGCAAC ATGAAACAGA AGAACATCTT GTTTGCTGGA
GAGATTGTAG CCATAGCCAG ACCTGGTGAT CAGAACTATG CCTGGACATC TATGTGGGCA
AAAAGGAAAG GAAATTTGAT CATTTGTATG TTTGATCAGA TTCCCTGTGA TGCATTTGAT
ATTGTCATAG CCAAAAACAA AGAGGAGTCT GGAAGAAGTC GTCATGGCTC TGCTGGATCG
ACTAGTGTCA AAAACAATGG ATCCTACAAT ATTCAATCTA TAAATGAAAT TGCAGGCAAG
TTCATCGATC TGCTTGATAT CCTGAAGTTC ACCAAGTTAG ATGACGTCAG CGACACTTTA
GCTGCAGAAT TGTCTGACGG CGATCAGAGC ATTATAGATG AGTACAGCGA GAGCGATGGC
AGTCCAATGG ACGAAGATGA TTATGAGCTG GCGCAGGATG TGGCTGATAG TGAATTAATC
AACCATACGC GTTATTACAC TTTGCAATTT AAGGGCGAAG AAAACATTCC CTGTGCCATC
ACTTCGAATC CACTTGAAAT CGATCTGAAC CGGTATGAAA TAAAGTTGAA AATACATGCC
ATGCCTTACA TCGCTGGTAT CTTTGTCATT AGCTCCAGCA ACTACACGAT ATTGTCGTGT
AACAACGCCA TTGCTAAGAA CATGTTCGGT AAATCTTCGC AAGAATTGAA TCATCATTCC
ATTGATGAGA TCATTCCCAA CTTTACGAAG ATCCTAACAG CTGGTTTGGC TGATAACTCT
GATTCGACCA GACTTTTGCC TGGTCTCGTA CTTCCTGAGC ATTTTTTTAG AAAGTATGAA
GCTATGTTGG AAAGTGATAA TGGTCACACC CTGATAGCGG AAGAGTTGTT CTTCAATTCC
AGAGGTATCA AAGGTTTACA TCGTGACGGA AAGACGATTC ATGTAGATGT TCAAGTCAGA
GCTTCCTCTT ACGACACGTT AGTTCTATGG GTGACGTATT CTCGTGCTTC CACGAAACGG
AATATCTCCA GTGAATTGGA TCGACTCAAT TCTAGCACCT CTTCTCTTTC ATTATCTTCT
GATGGTAAAT CTGTCATTTC ATTGACTTCC TTGTCGGATA CAAAGAGTAC GGTTAAACCG
GGAAATTTAA TGCAAATGAC CGAACTTAAG CCTAGCGATC CAGTTATAAA GTCCACTAAG
CATCTGAGAG CACCAACAGC GAGAGGCAAC ACTAATTTGC CGTCTCAATT AAAGTTGCTT
CCTATAACGC AAGACTTTCT TGATTTTACT CCAACAAAAG ATGAGATACT CAGAAAGAAC
AGTACCAGGC AGCCCAAAAA TGGTTCTTTC GGAATTCCCG TAAGCAGATT GAACTCTTCA
CTAGAAAAAG CCATTTCGAT AGAAAAACTC AACCAGAATC TTGAAATCTT CCAAAATAGG
AGAGTAATAT CTGATGGTTC CAATACTTTA ACTACTATCC CTATATCTCA AGACTCTACC
GAAACACAAG CTACAACTGC CAGCGGTATT CAAAGTGATA TTTCCAAGTT CGACAACAGA
TCATATCACA CTTACACCGA AGAGGAGATT TTACTACACG AACAGCGTAT GCTTGACGAA
AAGATGGCAA AGTCTACCCA ATGGCCCAAG GAAGTGGGGA GCAGAAGAAG AACCAAGAAG
TTTTCAGAAT TTGTAGTCTT GAAAGATATG GGAGAAGGTG CGTATGGTAA GGTGGTGTTG
GCTCAGCATA AAGAAGATCC GATCTACAAC ATCATCGTGA AGTGCATTGA CAAAGAAAGA
ATCTTGGTAG ATACCTGGGT TAGAGACAGA AAGCTCGGCA CAATTCCATC AGAAATCCAA
ATTATGGCAT ACTTGAACTC GGAGCCACAT CCTAATATCA TGCGTATTAT CGACTTCTTT
GAGGATCTGA AGTATTATTA CTTAGAGACT CCTATATTTG GAGATCCTCC AGCCATTGAT
TTGTTTGACT TCATTGAAGT TAAGAAAAAT ATGTCTGAAT TGGAGTGCCA GTTCATTTTC
AAACAGATTG TATCATCAAT CTACCATTTG CACAAACACG GTATTGTCCA TCGCGACATA
AAGGATGAAA ATGTCATTGT AGACGAAAAC GGGGTTATCA AGCTTATAGA TTTTGGTAGT
GCCGGTTACA CCAGACTGGG ACCCTTTGAT GTCTTTGTAG GTACCATTGA CTATGCATCT
CCAGAAGTGT TGAGAGGTGA AAAGTACGAA GGTAAACCAC AAGATATATG GGCTTTAGGA
ATCTTGTTGT ATACGATGAT GTACAAAGAG AACCCATTCT ACAACGTTGA CGAAATCATG
GAAGGTGATC TTCGTGTACC TTATGTGATC AGTGAAGCTT CGTTGAAATT AATAGAGAAG
ATACTTGTTA GGGAAGTAAA CAAGAGGCCC ACCATCACGG ATATAGTAGA AGACGAGTGG
TTACAGATAT GA
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| Protein sequence | FKDINEILNF PIESSHAYSY AHLSPNSLAL RLNVLKRSLE ILKDRPDLFK WQFLSSEPPS
IHSENHSGTN SPRIPSVHPL YTHGNLSTEI IDTIGNQKYK VQNNASSAAL AAFFRPPLKR
SDSLPITSES AEEIDDSLQL PKVTRVVSSS ATFSHDSILR DDLKDIITLL ENDLDSLVSK
NSEIASTLHD LSLSNNDKGD GITTKDNHLR YEFVKNKLLY ALATPFVENS AMTSSLLQSD
GSSSTSSIPV RPSTTALNML NNNYTTQPPP SSNSRPFHAM PAGKHTLPQS VFTVEVDTPW
SVKAANDLAC LMFGVSKNMI RALTLMDLIA PQFRDFVSDR LTKYMQEDLE TSLKMKRNSG
NMKQKNILFA GEIVAIARPG DQNYAWTSMW AKRKGNLIIC MFDQIPCDAF DIVIAKNKED
VKNNGSYNIQ SINEIAGKFI DSLDISKFTK LDDVSDTLAA ELSDGDQSII DDPMDEDDYE
SAQDVADSEL INHTRYYTLQ FKGEENIPCA ITSNPLEIDS NRYEIKLKIH AMPYIAGIFV
ISSSNYTILS CNNAIAKNMF GKSSQELNHH SIDEIIPNFT KILTAGLADN SDSTRLLPGL
VLPEHFFRKY EAMLESDNGH TSIAEELFFN SRGIKGLHRD GKTIHVDVQV RASSYDTLVL
WVTYSRASTK RNISSELDRL NSSTSSLSLS SDGKSVISLT SLSDTKTRGN TNLPSQLKLL
PITQDFLDFT PTKDEILRKN STRQPKNGSF GIPVSRLNSS LEKAISIEKL NQNLEIFQNR
RVISDGSNTL TTIPISQDST ETQATTASGI QSDISKFDNR SYHTYTEEEI LLHEQRMLDE
KMAKSTQWPK EVGSRRRTKK FSEFVVLKDM GEGAYGKVVL AQHKEDPIYN IIVKCIDKER
ILVDTWVRDR KLGTIPSEIQ IMAYLNSEPH PNIMRIIDFF EDSKYYYLET PIFGDPPAID
LFDFIEVKKN MSELECQFIF KQIVSSIYHL HKHGIVHRDI KDENVIVDEN GVIKLIDFGS
AGYTRSGPFD VFVGTIDYAS PEVLRGEKYE GKPQDIWALG ILLYTMMYKE NPFYNVDEIM
EGDLRVPYVI SEASLKLIEK ILVREVNKRP TITDIVEDEW LQI
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