| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54201 |
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| Symbol | SMP3 |
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| ID | 4836848 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 504742 |
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| End bp | 506343 |
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| Gene Length | 1602 bp |
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| Protein Length | 507 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388163 |
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| Product | alpha 1,2 mannosyltransferase |
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| Protein accession | XP_001382332 |
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| Protein GI | 150863755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000103091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGG TATTCAGTTG GAGAAGTTAC TATCTTGTTC TTCTTGCTCT CAGATTTTAC
TTTGCGCTCG CGAACTCGTA CATCCATCCA GATGAGCACT TCCAGAGCAT GGAGGTGATC
TGCAATAAGA TCCTCCACTA CTCTGGTAAC CTCCCGTGGG AATTCACGTC GGGCAACCAG
GCAAGAAGTA TGGGCCCATT GTACTTGATG TATGGACCAA TTCTTTATTC TATCAAGTGG
CTCGGACTGC AACTTACACC TCTCCAGATC TGGTATGTGG TGCGATTGCA AAATGTCTTC
TTAACGTGGA TCATCACAGA CATGTGCATT TACCGTCTAC TACCAACTAA GCCCGAGAGA
ATAAAAGGAG TCTACTTCAC CTTAAGCTCG TATGTCACTT TGGTATACCA ATCACATCTA
TTTTCCAATA GTATAGAAAC GTGTCTTTTG CTTCTAGCCA TTGTGATCAT TAATAATTTG
AGATTTGCAC AGGAGATCAA AACCAAAAGT GATGAGAATA GTCCCAATCT GAGCTTGTTA
TGGCTTGGGG TTATTGTTTC CATAGGAGTC TTCAATCGCG TCACGTTCCC TGCCTTTCTC
GTTTTACCAT TTTGGTACGT GCTCACATAC GTTTGGTGCC ATAAGGTAAG TGGAATCTAT
TTGGCTATTG GAGCCATTGT GCCCACGTAT TTGTTCATCT TGATCGATAG TTTGAGCTTT
GGAAAGTCAT GGGCTCAAAT CATAGCTTCC CCGTTCGACT TGGACAGTTA CGTTATCACA
CCATTGAACA ATCTAATATA CAACACTAAC TACCTGAACT TGGCTCAACA TGGCATTCAT
CCATATTATA CCCACATTCT TGTCAACTTG CCCCAACTTT TGGGTCCAGG CATCTTGTTC
TTATTTAAAA CGTCTTACTG GAAGACGACA CCGTTCTTGA GCATCGTGAG TGGCATTGTA
GTATTATCGC TTGTTCCTCA CCAAGAGCTC AGATTTTTGA TTCCTATTGT ACCTTTAGCC
TGTTGCTGTT TTGACCTTTA CTCGTACTCT ACAAATTACG AAGGAAAGCT TAGGCAGTCA
CTTTTGGGCT CCATATCGCT CAAGTCGTGG TACATCTTCA ACATTGCCAT GGCTATGCTT
ATGGGAGTAT TCCATCAGGG TGGTGTAGTT CCGGCCTTGG ATGAACTCCA CTTGCAATTG
TTCCAAAATA CCTCGACTAG TCTGGTACAA GTGTGGTGGA GAACGTATTC CCCACCAACA
TGGATGTTAG GAGATACAAA TAGCACAGTT CAGACGATTA CGCTCAACGA CGAGAACTTC
CACTTGGGTT ATGAGTTGGA TACCTCTAAA CAGAACTACG TCTTTGATAT GATGGGGACA
AATTATGACA AAGTGTACCA GTTTCTTGTA GGTTTGAAAA AGCAGAGGGA TAGACCTGTG
TACTTTATTA CACCTACAGC TTCGTTCAAT GTCAACTTTA AAAATCAAGC TCTCAAATTC
AATCTGACAT GGAACTATAC TTTTCATTTG GATATGGACC ATCTTGATTT TTCTGATTAT
GAGACTTTGG TCCCAGGCTT GTCGATTTAC GAAATGTTAT GA
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| Protein sequence | MSSVFSWRSY YLVLLALRFY FALANSYIHP DEHFQSMEVI CNKILHYSGN LPWEFTSGNQ
ARSMGPLYLM YGPILYSIKW LGSQLTPLQI WYVVRLQNVF LTWIITDMCI YRLLPTKPER
IKGVYFTLSS YVTLVYQSHL FSNSIETCLL LLAIVIINNL RFAQEIKTKS DENSPNSSLL
WLGVIVSIGV FNRVTFPAFL VLPFWYVLTY VWCHKVSGIY LAIGAIVPTY LFILIDSLSF
GKSWAQIIAS PFDLDSYVIT PLNNLIYNTN YSNLAQHGIH PYYTHILVNL PQLLGPGILF
LFKTSYWKTT PFLSIVSGIV VLSLVPHQEL RFLIPIVPLA CCCFDLYSQS LLGSISLKSW
YIFNIAMAML MGVFHQGGVV PALDELHLQF SVQVWWRTYS PPTWMLGDTN STNFHLGYEL
DTSKQNYVFD MMGTNYDKVY QFLVGLKKQR DRPVYFITPT ASFNVNFKNQ ALKFNSTWNY
TFHLDMDHLD FSDYETLVPG LSIYEML
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