| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54052 |
|---|
| Symbol | CBK1 |
|---|
| ID | 4837472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 2339136 |
|---|
| End bp | 2340596 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640388787 |
|---|
| Product | Serine/threonine-protein kinase CBK1 |
|---|
| Protein accession | XP_001383202 |
|---|
| Protein GI | 126133354 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.241648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AACTACGTTT ACTTCACGAG GCAACCCAAC TTGCTCAACA AGAACACCAA TGACAAGGCA
GCAGCTATTA AGTTGAAGTT GGAAAACTAC TACACCATGG CTGTGAGTCA TGCCATCGAA
AGAAATCAAA GAAGATTAGA TTTGGAGCAT AAGCTCTTGA CAGAAGAGTC CGGTTCCAGT
GAAGAAAGAA AGAATAGACA ATTGCAGAAC TTGGGTAAGA AGGAGTCACA GTTCTTGAGA
TTGAGAAGAA CAAAGCTTTC CTTAGAGGAT TTCACCACCG TCAAGGTTAT TGGTAAAGGT
GCATTTGGAG AAGTCAGATT GGTGCAGAAG AAAGATACTG GTAAGATTTA CGCCATGAAA
ACATTATTAA AGTCTGAAAT GTACAAAAAG GATCAATTAG CTCACGTGAA GGCCGAAAGA
GATGTCTTAG CAGGCAGTGA CTCGCCTTGG GTTGTGTCAT TATATTACTC CTTTCAGGAT
ACACAGTACT TGTACTTAAT CATGGAGTTT TTACCAGGAG GAGATCTTAT GACCATGTTG
ATCAGATGGC AAATTTTCAC TGAGGATATC ACCAGATTTT ACATGGCTGA GTGTGTATTG
GCCATTGAAG CTATTCACAA GCTTGGCTTT ATCCATCGTG ACATCAAGCC CGATAACATA
TTGATTGACA TCAGGGGCCA CATCAAGTTG TCAGACTTTG GGCTATCAAC CGGTTTTCAT
AAGACTCACG ACTCCAACTA CTACAAGAAA TTGTTAGAGA AAGAGGGCCC TTCGAACCAT
TTGCAACCGA ACCAGTTGAC CAGTGGCCGT AATTCGATGA TGGTGGATGC CATTCATTTG
ACAATGTCAA ACAGACAGCA GATGCAAACT TGGAGAAAGT CACGTAGACT TATGGCTTAT
TCCACTGTAG GTACCCCTGA CTATATTGCG CCAGAGATCT TTATTCACCA AGGGTATGGT
CAAGAATGCG ATTGGTGGTC TTTGGGTGCG ATCATGTTTG AGTGTTTAAT CGGCTGGCCG
CCTTTCTGCA GTGAGACACC ACACGAGACG TATCGTAAGA TTTTGAACTG GCAAGAGACG
TTACAAATTC CAGAGGATAT TCACTTGTCT CCAGAGAGTG AGGATTTGAT CCGGAAGTTA
TTGACGAGCT CGGAGAACCG ATTAGGTAGA TACGGAGGAG CAGAAGAAAT CAAGCGCCAT
CCATTCTTTA GAGGTGTGGA CTGGGAAACT ATCAGAAAAG TTGATGCACC ATTTATTCCT
AAATTGAGAT CTATTACCGA TACTCGATTC TTCCCTACAG ATGAGTTAGA AAACGTTCCA
GAGTCTCCAG CTTTGAGCAA AGCTATGGAA CAGAGAGAAC AAGACATGAA GAACGGCAAG
AAGAATGTTA AGGAAGATTT GCCGTTTATC GGATACACCT ATTCGAGATT TGATTATTTG
ACGAGAAAGA ACGCCTTGTG A
|
|---|
| Protein sequence | NYVYFTRQPN LLNKNTNDKA AAIKLKLENY YTMAVSHAIE RNQRRLDLEH KLLTEESGSS
EERKNRQLQN LGKKESQFLR LRRTKLSLED FTTVKVIGKG AFGEVRLVQK KDTGKIYAMK
TLLKSEMYKK DQLAHVKAER DVLAGSDSPW VVSLYYSFQD TQYLYLIMEF LPGGDLMTML
IRWQIFTEDI TRFYMAECVL AIEAIHKLGF IHRDIKPDNI LIDIRGHIKL SDFGLSTGFH
KTHDSNYYKK LLEKEGPSNH LQPNQLTSGR NSMMVDAIHL TMSNRQQMQT WRKSRRLMAY
STVGTPDYIA PEIFIHQGYG QECDWWSLGA IMFECLIGWP PFCSETPHET YRKILNWQET
LQIPEDIHLS PESEDLIRKL LTSSENRLGR YGGAEEIKRH PFFRGVDWET IRKVDAPFIP
KLRSITDTRF FPTDELENVP ESPALSKAME QREQDMKNGK KNVKEDLPFI GYTYSRFDYL
TRKNAL
|
|---|
| |