| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42694 |
|---|
| Symbol | BEM12 |
|---|
| ID | 4836959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 2520105 |
|---|
| End bp | 2521901 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388274 |
|---|
| Product | Bud emergence mediator |
|---|
| Protein accession | XP_001382712 |
|---|
| Protein GI | 150864034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.140632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTAACCATTT CAAAGCCCAG TCCGAAAGAA AATGTCGAAT CGAGTTTGCG AGCCAATATT
ATTCTCGTGT GCAAGTATGC GTTCAAGGCT GAAAACGACA ATGAGCTTAC AGTGAGCAAG
GGCTCCATCC TTAAGCTATT AGATCGTCCG GGGAACGGCT GGCTCTTGGT GAAATTTGTC
GATAGACTAG AGGAACCGGG CCTTATTCCT GCTCTGTATG TCGATATTGC AGTCAACGAC
CAGCACAATC CAGTGACGTT AGTTTGGCTT CAAAGCAGTA GCAAACAGTA CTCGCAAAAC
GACTTCATCG AAGAGCAGAA ATACTTGAAC ATGCAATTTA AATCGGTGTC CTCGCCCTTC
TTGACCATTA ACAATAGGGC ATTTCCCACC TCGGTGTCTA TCTCCAACTT CTTGCTTTCG
GAACAGCGAT ATTGGTACAG AGTGGATGTC GTATATTCAG ACCATTCAAA GGCATACCTA
TGTCGTTACT ACCAAGACTT TTACAACTTA CATATTAAAT TGTTGGGTCT AATGGCTGCC
AGTCTGCAAA TAGTCAGTGA AGAATTGAAG TTACCCAAAT TGCCGGAACC ACTCCCTACC
AACCATGACG TGGAAGATTC ATCTCAAATC ACATCACTCT TGAAGAGGTG CAATGCTTTA
AACATTTATG TAAACAAGTT GATCTTGAAC AAGTACTATC AAACGTCTCA AGTGTTGTTA
AATTGGTTGG ATTTAAACTA CGACGACTTG CCAAGTTTCG CTCTACCAAC TGATGCTGAA
GTCATGACAA ATGATCAAAT CAATGAGAAA ATATTGCCAA ATTCTATTAA CGTTGTGAAG
GAATACTACA GGAAAGAAGA GGTTGCTGAA TCTCAAGCGA AGTTGCCTCA AAGAACGAAA
TCTAAGAATA TCTACAATAA CTACCAACAG GCAAGAGTAC CACCTTCTTC AGCTACAAGA
CTGTTGTCGA CTAAGTCAGA CGGTGCAAAA CGTACACCCT CTACTTCTAA CACGTCCAAA
AATAACATCT CGAAGAATAG CATTTCAGCT CCACTAGTGG CCAACCAATC GTACGCTAAC
GGATCCAATG ATAACTATTC ACATGCCATA ACTCCGAACC AGTATTCCCA TGGTAGTAAT
TTTAACACTA GTCAACCAAA TGCTAATCAA CCAAATGCCA GCAACAATAA AGCTAATTCT
TATTCAAACG GTAAAAATGG CTCATCTTAT GTTAACAGCG CTAACACCAG CGTCCAAGAT
ACAAGCTATG CAAATAATAG TGTGAACACT TCTATGAATA GTTCATCGAG TACACCTACA
AATGTGCAAC CACCGCAGAT GGCGACCACT CCTCAGTTCA GGAAAACCAA TTCACCAGGA
TACAATTCTC CGTCGTACAA GCACAAGATT TCTCCTCCAA AGAATACACA TTCTCCGTAT
GTGTCTAATT CTCCTACATA TCCACATATT CCCTTATCAA ATAATAGTCC TGAGGTCAAA
TACGGTCAAA CTTTACCGCC CCTGCCTCAA GAATTGTTAT CTCATTCAGT TAGTAGGAAC
CTGTTTATCA AGTGCAAAAT TGTAAACTTC AACAATGAAA TTGTTGCATT GAAGTTGAAC
AAGCAGTCAA TCAAGTCCAT TAATGATTTG AAGGTTTTGA TAAAACAGAA GATTTACTTC
ACCAAGTTGT TCATCAAGTT GCCTAATTTA AACAATTATG AGAGTATCGA CAATGTGAAT
TTCAATATAA ATGAGTTCTT GAGGTTCAAC GACAAAGTTA TGCTTAAGAT CAGTTGA
|
|---|
| Protein sequence | LTISKPSPKE NVESSLRANI ILVCKYAFKA ENDNELTVSK GSILKLLDRP GNGWLLVKFV
DRLEEPGLIP ASYVDIAVND QHNPVTLVWL QSSSKQYSQN DFIEEQKYLN MQFKSVSSPF
LTINNRAFPT SVSISNFLLS EQRYWYRVDV VYSDHSKAYL CRYYQDFYNL HIKLLGLMAA
SSQIVSEELK LPKLPEPLPT NHDVEDSSQI TSLLKRCNAL NIYVNKLILN KYYQTSQVLL
NWLDLNYDDL PSFALPTDAE VMTNDQINEK ILPNSINVVK EYYRKEEVAE SQAKLPQRTK
SKNIYNNYQQ ARVPPSSATR SLSTKSDGAK RTPSTSNTSK NNISKNSISA PLVANQSYAN
GSNDNYSHAI TPNQNSFIKC KIVNFNNEIV ALKLNKQSIK SINDLKVLIK QKIYFTKLFI
KLPNLNNYES IDNVNFNINE FLRFNDKVML KIS
|
|---|
| |